BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20853 (UTR included)
(3610 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3236_C1 3786 0.0
>BF14_3236_C1
Length = 2292
Score = 3786 bits (1910), Expect = 0.0
Identities = 1968/1986 (99%), Gaps = 1/1986 (0%)
Strand = Plus / Plus
Query: 419 atatttatgtttaattttttccatttatattaatataataagtgaaaaatcgttactata 478
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 2 atatttatgtttaattttttctatttatattaatataataagtgaaaaatcgttactata 61
Query: 479 aatacattttttta-atgttattatgggtccaccacctgtagtgactggtatttctccga 537
||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aatacatttttttttatgttaatatgggtccaccacctgtagtgactggtatttctccga 121
Query: 538 aagaaggtcctccaggaacaagagtgactattcggggggagtttcttggtaccaccgcta 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aagaaggtcctccaggaacaagagtgactattcggggggagtttcttggtaccaccgcta 181
Query: 598 ctgatttaattggtttgaaaatctgtggttgtgagtgtttgctatcagcagaatggaaga 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ctgatttaattggtttgaaaatctgtggttgtgagtgtttgctatcagcagaatggaaga 241
Query: 658 gtcgaaacaaaatagtggctagatctggaccttgtaaaggcagaggtgatattatagtca 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gtcgaaacaaaatagtggctagatctggaccttgtaaaggcagaggtgatattatagtca 301
Query: 718 ctacaaagtcgggcggagagggtacctctactgtacaattcagaggttaccatgaatcaa 777
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ctacaaagtcaggcggagagggtacctctactgtacaattcagaggttaccatgaatcaa 361
Query: 778 ttggcccagtgaaagagagtgctgtttgggtggaagaagctgctcctccatcccttccat 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ttggcccagtgaaagagagtgctgtttgggtggaagaagctgctcctccatcccttccat 421
Query: 838 ggggaagaagaccaatgtcacccacagcttacacaccccctgaccccctaggtctatcaa 897
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 422 ggggaagaagaccaatgtcacccacagcttacacaccccctgatcccctaggtctatcaa 481
Query: 898 ctgagggagaggatagcaagttccccgaagaggagctcaacgaattatttcctgatggat 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ctgagggagaggatagcaagttccccgaagaggagctcaacgaattatttcctgatggat 541
Query: 958 ctggaaagctgtctgatgagaattttcaaccgggctggtatcttctggaacatcatagca 1017
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 542 ctggaaagctgtctgatgagaattttcaaccaggctggtatcttctggaacatcatagca 601
Query: 1018 acacatctttcgaggacttgaaggccggaatggtgtttttgcagagaaaggtggaaggtc 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 acacatctttcgaggacttgaaggccggaatggtgtttttgcagagaaaggtggaaggtc 661
Query: 1078 agaaggaaggtcaactcagcttcctgaaagccaacaccggtgctgtaatggatcaactgg 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 agaaggaaggtcaactcagcttcctgaaagccaacaccggtgctgtaatggatcaactgg 721
Query: 1138 atagactggtgcttcttaagaacatgtatgaggacgatcagaggaagaatggcaaagaac 1197
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 722 atagactggtgcttcttaagaacatgtatgaggatgatcagaggaagaatggcaaagaac 781
Query: 1198 ccttgccgagcttgcagagtgcaattgaagaatccataaccctcgctgattcactatttt 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 ccttgccgagcttgcagagtgcaattgaagaatccataaccctcgctgattcactatttt 841
Query: 1258 ctgaaattttaacacgcaaagagaacgctgataagacgcgcgaggctctgtccttgttga 1317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 ctgaaattttaacacgcaaagagaacgctgataagacgcgcgaggctctgtccttgttga 901
Query: 1318 cacgtcacaagttcctgttccagctgccagcttccatagacaagaatatacggaagaaag 1377
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 cacgtcacaagttcctattccagctgccagcttccatagacaagaatatacggaagaaag 961
Query: 1378 aatacgacctcgttgtcaatgattatgcgagggtcaagaaccttttcggcagcaccgatg 1437
||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 962 aatacgacctcgttgtcaatgattatgcgagggtcaagaacctcttcggcaacaccgatg 1021
Query: 1438 tgaagttattccaaaaaatactcaccgaaatagacaggaagattgaggatctgaaggaga 1497
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1022 tgaagttattccaaaaaatactcaccgaaatagacaggaagattgaggacctgaaggaga 1081
Query: 1498 atttacacaatcgtatgaagactatgcccataaacgttcaagagcagacgaaatatataa 1557
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 atttacataatcgtatgaagactatgcccataaacgttcaagagcagacgaaatatataa 1141
Query: 1558 gacttcttataagtttgaactgggaaggtgacgccgcttgggtcgcgataacaacacgca 1617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142 gacttcttataagtttgaactgggaaggtgacgccgcttgggtcgcgataacaacacgca 1201
Query: 1618 aggattacctcatggctctcatgagtaaggtcaaggaacacttcaagcagaaggaggaac 1677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1202 aggattacctcatggctctcatgagtaaggtcaaggaacacttcaagcagaaggaggaac 1261
Query: 1678 aggaatccaatgaaaaaggtcgccgtcgtaaggagagcgaggagggtccgtggagcgcgg 1737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1262 aggaatccaatgaaaaaggtcgccgtcgtaaggagagcgaggagggtccgtggagcgcgg 1321
Query: 1738 tgcggtcggcgtggtgcgaggcggcctgcggagccctggcctcggaactgcacgcgctgt 1797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1322 tgcggtcggcgtggtgcgaggcggcctgcggagccctggcctcggaactgcacgcgctgt 1381
Query: 1798 ggccgctcgctagacggtacttcgcgggggagctggcgggcgagcccggcgacccgcaga 1857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1382 ggccgctcgctagacggtacttcgcgggggagctggcgggcgagcccggcgacccgcaga 1441
Query: 1858 gacacaccgctttaaaggagatgattatagccgctgtggaagtattctcagatcagatgc 1917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1442 gacacaccgctttaaaggagatgattatagccgctgtggaagtattctcagatcagatgc 1501
Query: 1918 gttcgtgtctattgtcaagcggtcccagcgctgggtctgcggtagcggccgacgttctaa 1977
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1502 gttcgtgtctattgtcaagcggtcccagcgcagggtctgcggtagcggccgacgttctaa 1561
Query: 1978 ggacgaggctgctggcaaacctccgcagcctgagggacgcttacgactcactcctgaagt 2037
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1562 ggacgaggctgctggcaaacctccgcagcctgagggacgcttacgactcactcctcaagt 1621
Query: 2038 tagatttaccatcgcagcccctgagtatcgtggagaaggtggttttcgactaccgcgtgt 2097
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1622 tagatttaccatcgcagcccctgagtatcgtggagaaggtggttttcgactaccgcgtgt 1681
Query: 2098 tcggcatgacggtgttcctccaacgagcccacaagagagtgaaggcgctctccgagactg 2157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1682 tcggcatgacggtgttcctccaacgagcccacaagagagtgaaggcgctctccgagactg 1741
Query: 2158 acacgtggaagataaaagaattctcagactacggagccatcactgaacttcctcacctgc 2217
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1742 acacctggaagataaaagaattctcagactacggagccatcactgaacttcctcacctac 1801
Query: 2218 tagagtcgtacctgacggacgcgctgtcatctatatacaagtgcgtgttgtcgagcggcc 2277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1802 tagagtcgtacctgacggacgcgctgtcatctatatacaagtgcgtgttgtcgagcggcc 1861
Query: 2278 ggcgcgagtcggcgctgctggtcgacggcggcgagccattggtggtgctgcggactcata 2337
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1862 ggcgcgagtcggcgctgctggtcgacggcggcgagccattggtggtgctgcggacccata 1921
Query: 2338 cgcagcaaatcctcctggcgtacgtcgctgtgctccaggagatagcgctgcaacacgacg 2397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1922 cgcagcaaatcctcctggcgtacgtcgctgtgctccaggagatagcgctgcaacacgacg 1981
Query: 2398 atcagg 2403
||||||
Sbjct: 1982 atcagg 1987
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 420,502
Number of extensions: 20943
Number of successful extensions: 20943
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 20942
Number of HSP's successfully gapped: 1
Length of query: 3610
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3592
Effective length of database: 8,109,745
Effective search space: 29130204040
Effective search space used: 29130204040
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)