BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20859 (UTR included)
(3067 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01039A1H08 781 0.0
BF01019A1H08 137 1e-31
BF14_335_C4 127 1e-28
BF14_335_C2 96 4e-19
BF01049B1F01 82 6e-15
BF01052B2H04 80 2e-14
BF01057B1C11 70 2e-11
>BF01039A1H08
Length = 705
Score = 781 bits (394), Expect = 0.0
Identities = 406/410 (99%)
Strand = Plus / Plus
Query: 1884 gtgcgtcaggaatgtggccctccatccaccatagacgtcagtaactcaacatctccaagg 1943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gtgcgtcaggaatgtggccctccatccaccatagacgtcagtaactcaacatctccaagg 355
Query: 1944 tcaccccccggagctagccggcgtgatgcgctccgcgctccacctcccgatactgaactg 2003
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 356 tcaccccccggagctagccggcgtgacgcgctccgcgctccacctcccgatactgaactg 415
Query: 2004 ctccaattcgcagctaccctcgcctccagtaagaaactgttcgccagtctctctgataga 2063
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 cttcaattcgcagctaccctcgcctccagtaagaaactgttcgccagtctctctgataga 475
Query: 2064 ctctgcgatgaacccgacttcgctatcgaaggcaacgaacggtgctggaatggagaaact 2123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ctctgcgatgaacccgacttcgctatcgaaggcaacgaacggtgctggaatggagaaact 535
Query: 2124 attggagaatacaccaaggccttagtggcatcagcatccataagtgatcagaaatacaat 2183
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 536 attggagaatacaccaaggccttagtggcatcagcctccataagtgatcagaaatacaat 595
Query: 2184 ccagagatcacgaagatgtcaacccaagattcaagagtggcagcacttggtgacaggctg 2243
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 596 ccagagatcacgaagatgtcaacccaagattcaagagtggcagcacttggcgacaggctg 655
Query: 2244 cggcaagcgagacagttgctggtatcacactgggggtcaatgaccgctgc 2293
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 cggcaagcgagacagttgctggtatcacactgggggtcaatgaccgctgc 705
Score = 553 bits (279), Expect = e-157
Identities = 291/295 (98%)
Strand = Plus / Plus
Query: 1133 cgaacaggtgctgtcgaatgctgatgaggaatgcggcaacaaactgctgctgatgggagg 1192
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 1 cgaacaggtgctgtcgaatgctgatgaggaatgcggcaacaaactgctgctaatgggtgg 60
Query: 1193 ctgttctagatgtaaaggacacgacgtcagcccatgtcggaactattgcttgaacgtggc 1252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgttctagatgtaaaggacacgacgtcagcccatgtcggaactattgcttgaacgtggc 120
Query: 1253 tagagggtgtatagggtcccttgtagttgagttggatgctccatgggctggttacgtgga 1312
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tagagggtgcatagggtcccttgtagttgagttggatgctccatgggctggttacgtgga 180
Query: 1313 aggagtagagcgtctggcgagagctgatgctgatgcagagcttcgttcactggacgccag 1372
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aggagtagagcgcctggcgagagctgatgctgatgcagagcttcgttcactggacgccag 240
Query: 1373 agtgtctgaagcaatcatgcacgccttggagaaccacgtgattctcgagaaaaag 1427
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agtgtctgaagcaatcatgcacgccttggagaaccacgtgattctcgagaaaaag 295
>BF01019A1H08
Length = 504
Score = 137 bits (69), Expect = 1e-31
Identities = 108/121 (89%)
Strand = Plus / Minus
Query: 1699 tagatagggaccccttaaacctacacgtgggtcgcaagtcccaggcactattgaggcccc 1758
|||||||| |||||||||||||||| |||||||||| ||||||||||| |||| || ||
Sbjct: 491 tagataggagccccttaaacctacacctgggtcgcaactcccaggcactgttgaagctcc 432
Query: 1759 tccccctgcaacgcgatggacccagcatccgcacggggaatccatggaatgctgagaggt 1818
|| |||||||||||||||||||| ||| |||||||| |||||||| ||||||| ||||||
Sbjct: 431 tctccctgcaacgcgatggacccggcacccgcacggtgaatccattgaatgctaagaggt 372
Query: 1819 t 1819
|
Sbjct: 371 t 371
>BF14_335_C4
Length = 1491
Score = 127 bits (64), Expect = 1e-28
Identities = 98/108 (90%), Gaps = 1/108 (0%)
Strand = Plus / Plus
Query: 1709 ccccttaaacctacacgtgggtcgcaagtcccaggcactattgaggcccctccccctgca 1768
|||||||||||||||| |||||||||||||||||||||| |||| || |||| || ||||
Sbjct: 1248 ccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctctcc-tgca 1306
Query: 1769 acgcgatggacccagcatccgcacggggaatccatggaatgctgagag 1816
||||||||| ||| ||| |||||||| |||||||||||||||||||||
Sbjct: 1307 acgcgatggtccccgcaaccgcacggtgaatccatggaatgctgagag 1354
>BF14_335_C2
Length = 1827
Score = 95.6 bits (48), Expect = 4e-19
Identities = 93/108 (86%)
Strand = Plus / Minus
Query: 1712 cttaaacctacacgtgggtcgcaagtcccaggcactattgaggcccctccccctgcaacg 1771
||||||||||||| || ||||||| ||||||||||| |||| || |||| ||||||||||
Sbjct: 922 cttaaacctacacctgtgtcgcaaatcccaggcactgttgaagctcctctccctgcaacg 863
Query: 1772 cgatggacccagcatccgcacggggaatccatggaatgctgagaggtt 1819
|| |||||| ||| |||||||| |||||||| ||| ||| |||||||
Sbjct: 862 cggcggacccggcacccgcacggtgaatccatagaaagctaagaggtt 815
Score = 73.8 bits (37), Expect = 1e-12
Identities = 59/65 (90%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 1532 taatagagctcacggttccttgggaaaccaacatccc-aaagaccatgccatcaaggtca 1590
||||||||| |||||||||||| | ||||||||||| ||| ||||||||||||||||||
Sbjct: 1238 taatagagcctacggttccttggaagaccaacatccccaaaaaccatgccatcaaggtca 1179
Query: 1591 acaag 1595
|||||
Sbjct: 1178 acaag 1174
Score = 71.9 bits (36), Expect = 6e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 1616 tctctacaatctgctaaaacacttgggcctgtcaagaactaacatcagttcattcttgga 1675
|||||||| || |||||| ||||||||||||| |||||||||| |||||||||||| ||
Sbjct: 1086 tctctacagcctactaaaatacttgggcctgtccagaactaacaccagttcattcttcga 1027
Query: 1676 acgt 1679
||||
Sbjct: 1026 acgt 1023
>BF01049B1F01
Length = 840
Score = 81.8 bits (41), Expect = 6e-15
Identities = 66/73 (90%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 1699 tagatagggaccccttaaacctacacgtgggtcgcaagtcccaggcactattgaggcccc 1758
||||||||| ||||||| |||||||| |||||||||||||||||||||| |||| || ||
Sbjct: 658 tagataggg-ccccttacacctacacctgggtcgcaagtcccaggcactgttgaagctcc 600
Query: 1759 tccccctgcaacg 1771
|| ||||||||||
Sbjct: 599 tctccctgcaacg 587
>BF01052B2H04
Length = 668
Score = 79.8 bits (40), Expect = 2e-14
Identities = 62/68 (91%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 1818 ttggcaccgcatccgcaacagagatgttgcggatgtccatgggcgacggtggctgctgcc 1877
|||||| |||||||||||||||| ||| |||| ||||||||||||||||| |||||||||
Sbjct: 262 ttggcaacgcatccgcaacagagttgt-gcgggtgtccatgggcgacggtagctgctgcc 204
Query: 1878 ccccaagt 1885
| ||||||
Sbjct: 203 caccaagt 196
>BF01057B1C11
Length = 848
Score = 69.9 bits (35), Expect = 2e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 1815 aggttggcaccgcatccgcaacagagatgttgcggatgtccatgggcgacggtggctgct 1874
||||||||| ||||||||||||| ||||||||| || |||||||||||| |||||| ||
Sbjct: 222 aggttggcaacgcatccgcaacatagatgttgcaaatttccatgggcgacagtggctact 281
Query: 1875 gcc 1877
|||
Sbjct: 282 gcc 284
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 284,811
Number of extensions: 5107
Number of successful extensions: 5107
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 5104
Number of HSP's successfully gapped: 11
Length of query: 3067
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3049
Effective length of database: 8,109,745
Effective search space: 24726612505
Effective search space used: 24726612505
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)