BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20860 (UTR included)
(1663 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2215_C1 1114 0.0
>BF14_2215_C1
Length = 850
Score = 1114 bits (562), Expect = 0.0
Identities = 571/574 (99%)
Strand = Plus / Plus
Query: 257 gtcgtatcgtgaatcgactttggtttcacaattcgctggcatatcactcgggcaataatt 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtcgtatcgtgaatcgactttggtttcacaattcgctggcatatcactcgggcaataatt 60
Query: 317 gaaacgcaacgcctttttgtattttaattaccagtcatatagtgaaattcaaagcaaata 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaaacgcaacgcctttttgtattttaattaccagtcatatagtgaaattcaaagcaaata 120
Query: 377 agtataagttgaagttcattatcaaaagttgtaaataaataatatttttttaataaacag 436
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 121 agtataagttgaagttcattatcaaaagttgtatataaataatatttttttaataaacag 180
Query: 437 gaggtaagacaaagaaaacaagtttttatactagtatatcgcctccttctacaactcatc 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaggtaagacaaagaaaacaagtttttatactagtatatcgcctccttctacaactcatc 240
Query: 497 caagatgaagaaaaaggtgttgctgatgggtaaaagcggatcagggaagaccagtatgag 556
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caatatgaagaaaaaggtgttgctgatgggtaaaagcggatcagggaagaccagtatgag 300
Query: 557 atccattatatttgccaattacattgcaagagacaccaggaggctaggagcaacaattga 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atccattatatttgccaattacattgcaagagacaccaggaggctaggagcaacaattga 360
Query: 617 tgtggaacactcacatgtaagatttcttgggaacttagtcctcaatttatgggactgcgg 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgtggaacactcacatgtaagatttcttgggaacttagtcctcaatttatgggactgcgg 420
Query: 677 tggccaggaggctttcatggagaactactttgcatcacaaagggacaatatcttccggaa 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tggccaggaggctttcatggagaactactttgcatcacaaagggacaatatcttccggaa 480
Query: 737 tgttgaagtactgatatatgtgtttgatgtcgagagcagggaaatggaaaaggacatgca 796
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgttgaagtactaatatatgtgtttgatgtcgagagcagggaaatggaaaaggacatgca 540
Query: 797 ttattatcagtcatgtctcgaagctattttacag 830
||||||||||||||||||||||||||||||||||
Sbjct: 541 ttattatcagtcatgtctcgaagctattttacag 574
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 262,266
Number of extensions: 6842
Number of successful extensions: 6842
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6842
Number of HSP's successfully gapped: 1
Length of query: 1663
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1646
Effective length of database: 8,119,229
Effective search space: 13364250934
Effective search space used: 13364250934
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)