BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20880 (UTR included)
(1823 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01060B2D11 1154 0.0
>BF01060B2D11
Length = 766
Score = 1154 bits (582), Expect = 0.0
Identities = 591/594 (99%)
Strand = Plus / Plus
Query: 194 tgtattattatcaaattcaatacaatttatgagagaataaaactttaaaataattaaata 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtattattatcaaattcaatacaatttatgagagaataaaactttaaaataattaaata 60
Query: 254 tgtccaattccggtgacaaaccaaacgcaaatggtgtcaacacggatcctctacagagac 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtccaattccggtgacaaaccaaacgcaaatggtgtcaacacggatcctctacagagac 120
Query: 314 tagcttcgtttaaggccccaagagacctatcactaggtggattaaagccaaataaaaaaa 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tagcttcgtttaaggccccaagagacctatcactaggtggattaaagccaaataaaaaaa 180
Query: 374 tcttcactccaaacttaaatgtaactaggaataaaaataaaggtgcttcgtcaacaagta 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcttcactccaaacttaaatgtaactaggaataaaaataaaggtgcttcgtcaacaagta 240
Query: 434 atcgtgattctaaaaaagatgagagaaacagacgggatcgcaagaacgataaaaataaga 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atcgtgattctaaaaaagatgagagaaacagacgggatcgcaagaacgataaaaataaga 300
Query: 494 acttcaaaaacggaccaaatattataaagtccagcggagtattctctgaaggtctgggta 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acttcaaaaacggaccaaatattataaagtccagcggagtattctctgaaggtctgggta 360
Query: 554 gtgctgaacgacatcactccagtagggtgtcctatggacgtgacgttgattcctcacaca 613
||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 361 gtgctgaacgacatcactccagtagagtgtcctatggacgtgacattgattcctcacaca 420
Query: 614 ctctccaaaaacctacactaagggtcaaggatgtagtaaagatagataaagagttggagg 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctctccaaaaacctacactaagggtcaaggatgtagtaaagatagataaagagttggagg 480
Query: 674 aacagaaaatccaagaggcttttggtgagaacaatgcttttgatgatgaaggagaagact 733
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 481 aacagaaaatccaagaggcttttggtgagaacaacgcttttgatgatgaaggagaagact 540
Query: 734 tcaaacaggtgttggacattgaagctcctatcaagttacccatggacgacggaa 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tcaaacaggtgttggacattgaagctcctatcaagttacccatggacgacggaa 594
Score = 319 bits (161), Expect = 9e-87
Identities = 167/170 (98%)
Strand = Plus / Plus
Query: 865 acggctgtgttggaacagaagcccttggctgatgtgaaggaagtgtatgaagattcgagt 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 acggctgtgttggaacagaagcccttggctgatgtgaaggaagtgtatgaagattcgagt 653
Query: 925 gttatgaacctgttgcggagtgacaaaccaacactcatattgttacagttagccgactcc 984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 gttatgaacctgttgcggagtgacaaaccaacactcatattgttacagttagccgactcc 713
Query: 985 ctgccgggcagaggtggtgctagtgatgataggaaacatgagcctgggac 1034
||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 714 ctgccgggcagnnntggtgctagtgatgataggaaacatgagcctgggac 763
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 241,641
Number of extensions: 5849
Number of successful extensions: 5849
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5849
Number of HSP's successfully gapped: 2
Length of query: 1823
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1806
Effective length of database: 8,119,229
Effective search space: 14663327574
Effective search space used: 14663327574
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)