BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20912 (UTR included)
(1867 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_941_C1 1691 0.0
BF01019B1H04 617 e-176
>BF14_941_C1
Length = 890
Score = 1691 bits (853), Expect = 0.0
Identities = 882/891 (98%), Gaps = 1/891 (0%)
Strand = Plus / Plus
Query: 479 cttgacgagtgaaagattaaagatgctgcgttttggaacattcctcgctatcaccgtggc 538
|||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttgaccattgaaagattaaagatgctgcgttttggaacattcctcgctatcaccgtggc 60
Query: 539 gctagctgcagcggctcctaatccagtctctcacatcttagagctagacctgtctccaga 598
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 61 gctagctgcagcggctcctaatccagtctctcacatcttagagctggacctgtctccaga 120
Query: 599 ggaggcacagaagtatcttcagagtcctcccttcagtgaaccagctctctccggacgtac 658
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 121 ggaggcacagaagtatcttcagagtcctcccttcagtgaaccggctctctccggacgtac 180
Query: 659 tgctattttgcctttgattaaattcaatgacccgaggtttcgttcggcggaggccgggcc 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgctattttgcctttgattaaattcaatgacccgaggtttcgttcggcggaggccgggcc 240
Query: 719 cacgtacggacattattggaagaatggacacgaaattgaaaacccagaggactacgttga 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cacgtacggacattattggaagaatggacacgaaattgaaaacccagaggactacgttga 300
Query: 779 agaggtatacgacgcaaaacaattccacggacaagacggcttaggtgcttacggttacgg 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agaggtatacgacgcaaaacaattccacggacaagacggcttaggtgcttacggttacgg 360
Query: 839 ctatgagactcctgaatcagcgaaggtcgagaatagagtacgttcgggaaatgttcaagg 898
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 361 ctatgagactcctgaatcagcgaaggtcgagaatagagtacgttcgggaaacgttcaagg 420
Query: 899 ttcatacacgtacagggacggaaataacgaactcatcaaggtgcgttactggtctgacgg 958
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttcatacacgtacagggacgggaataacgaactcatcaaggtgcgttactggtctgacgg 480
Query: 959 cacaggtttccaccaggaagacaacatccccaaggtggtgttgaagcctgttgaagaagc 1018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cacaggtttccaccaggaagacaacatccccaaggtggtgttgaagcctgttgaagaagc 540
Query: 1019 ggaagacgtgagacaggctcgtctcgcccacgagaaggcttggcaggaggccgccgccgc 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggaagacgtgagacaggctcgtctcgcccacgagaaggcttggcaggaggccgccgccgc 600
Query: 1079 cgctcgcaagcagccagaccctcaaggagagtactacaggcaatacaactaccagccaag 1138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cgctcgcaagcagccagaccctcaaggagagtactacaggcaatacaactaccagccaag 660
Query: 1139 tgttgctgagccccagcctgactaccaaccatcagcgtcagagcctcgtcagtactatga 1198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tgttgctgagccccagcctgactaccaaccatcagcgtcagagcctcgtcagtactatga 720
Query: 1199 acagaacgtcgctccctctaccacctccaccactcctgaacccaccggtcctccacgagg 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 acagaacgtcgctccctctaccacctccaccactcctgaacccaccggtcctccacgagg 780
Query: 1259 tttcttctacagcttcaactaccccgtgtccatcctcgtccccaagaacgaggaacagct 1318
||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||
Sbjct: 781 tttcttctacagcttcaactaccccgtgtccatcctcgtcccc-agancgangaacagct 839
Query: 1319 tggcagcagttactccaaacagacagttacatcggcgcgtcaaaactgata 1369
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 tggcagcagttactccaaacagacagttacatcggcgcgtcaaaactgata 890
>BF01019B1H04
Length = 574
Score = 617 bits (311), Expect = e-176
Identities = 323/327 (98%)
Strand = Plus / Plus
Query: 1541 taaaagcattgccgtttatattaagtaggttaagtaagcgatatacatacaattcgttgc 1600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taaaagcattgccgtttatattaagtaggttaagtaagcgatatacatacaattcgttgc 60
Query: 1601 acctaattatgtctccaatgacatacatttaaggtgcacttgaaagtaatgataactaga 1660
||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 61 acctaattatgtctcgaacgacatacatttaaggtgcacttgaaagtaatggtaactaga 120
Query: 1661 tttatattgtcgatatgaaaattataacaaaatattaaatactttaattggactggagtt 1720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttatattgtcgatatgaaaattataacaaaatattaaatactttaattggactggagtt 180
Query: 1721 taaaagtgtaactcgaaattattgttacgtgaaaacagatagctttttattgattttatt 1780
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taaaagtgtaactcgaaatttttgttacgtgaaaacagatagctttttattgattttatt 240
Query: 1781 ttttatattgatgagaatatttatttcttatttgcttagtaagttaaactcttgaaccca 1840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttttatattgatgagaatatttatttcttatttgcttagtaagttaaactcttgaaccca 300
Query: 1841 gtcttaatttttagtatttccacaaga 1867
|||||||||||||||||||||||||||
Sbjct: 301 gtcttaatttttagtatttccacaaga 327
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 227,839
Number of extensions: 5495
Number of successful extensions: 5495
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5494
Number of HSP's successfully gapped: 2
Length of query: 1867
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1850
Effective length of database: 8,119,229
Effective search space: 15020573650
Effective search space used: 15020573650
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)