BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20924 (UTR included)
(2272 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1827_C1 1417 0.0
>BF14_1827_C1
Length = 864
Score = 1417 bits (715), Expect = 0.0
Identities = 736/743 (99%)
Strand = Plus / Plus
Query: 861 gacgtaattggcctaaactgtttacaagaaatcgataagatcaggaagaatgaaaacctt 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gacgtaattggcctaaactgtttacaagaaatcgataagatcaggaagaatgaaaacctt 181
Query: 921 atacgtcgattggatttggtcacagcaaatagtagtaaaaataaaaatgctattgagaag 980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 atacgtcgattggatttggtcacagcaaatagtagtaaaaataaaaatgctattgagaag 241
Query: 981 tatgccgaaaccaataatatgcgaatcttgcattggccgaacttgaacatcaacgaaggt 1040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tatgccgaaaccaataatatgcgaatcttgcattggccgaacttgaacatcaacgaaggt 301
Query: 1041 gaatacgacattggtttgatagtggcattcggtcatttaattaaggccgatgtactcaaa 1100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gaatacgacattggtttgatagtggcattcggtcatttaattaaggccgatgtactcaaa 361
Query: 1101 aaattccctctaggtatggtgaatgttcatcctagtctgttaccccgctggcgtggtgct 1160
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 362 aaattccctctaggtatggtgaatattcatcctagtctgttaccccgctggcgtggtgct 421
Query: 1161 gcaccaattatttacactctaatgcatggtgataccgtaggaggtgtatcacttatgaaa 1220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gcaccaattatttacactctaatgcatggtgataccgtaggaggtgtatcacttatgaaa 481
Query: 1221 attaaaccagacatatttgatgttggtgaaataataagtcaacaaagagttccagtatct 1280
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 attaaaccagacatattcgatgttggtgaaataataagtcaacaaagagttccagtatct 541
Query: 1281 gatactataaagttgccagaactaacaagacaattttcggatattggtgctaaaatgttg 1340
|| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 542 gacactataaagttgccagaactaacaagacaattttcggacattggtgctaaaatattg 601
Query: 1341 gtgaactgcttgaagaacttacccagaagtcttgagaatgctcagcctcagagcaatgaa 1400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gtgaactgcttgaagaacttacccagaagtcttgagaatgctcagcctcagagcaatgaa 661
Query: 1401 ggtgtcacctatgccaagaagataaataaatcgattagccaagtaagatggatggaaatg 1460
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 662 ggtgtcacctatgccaagaagataaataaatcgatcagccaagtaagatggatggaaatg 721
Query: 1461 agtgccaaagaggtttacaacttgtaccgtgcaatatatggattatatccattaacaaca 1520
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 722 agtgccaaagaggtttacaacttataccgtgcaatatatggattatatccattaacaaca 781
Query: 1521 atgtttaaagataagcaagtgaagttgtttaatgcatttttagtaaataatgacttgtat 1580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 atgtttaaagataagcaagtgaagttgtttaatgcatttttagtaaataatgacttgtat 841
Query: 1581 agtgataaacccatcggaaccct 1603
|||||||||||||||||||||||
Sbjct: 842 agtgataaacccatcggaaccct 864
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 368,372
Number of extensions: 9248
Number of successful extensions: 9248
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9248
Number of HSP's successfully gapped: 1
Length of query: 2272
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2255
Effective length of database: 8,119,229
Effective search space: 18308861395
Effective search space used: 18308861395
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)