BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20965 (UTR included)
(1654 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01046B2E03 1576 0.0
>BF01046B2E03
Length = 810
Score = 1576 bits (795), Expect = 0.0
Identities = 801/803 (99%)
Strand = Plus / Plus
Query: 736 tttcgactgtgttccgtcatgaggatgatattgtcatcgggaaggtcttcatgcaggaac 795
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 tttcgactgtgttccgtcacgaggatgatattgtcatcgggaaggtcttcatgcaggaac 67
Query: 796 tcaaagaaggaaggagagcttctcacaccgcgccacaggttctattttcacacaaagagc 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 tcaaagaaggaaggagagcttctcacaccgcgccacaggttctattttcacacaaagagc 127
Query: 856 caccattagagctgttggatactgatgctaaagtaggcgaaaatataagttatgtaacat 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 caccattagagctgttggatactgatgctaaagtaggcgaaaatataagttatgtaacat 187
Query: 916 ttgtgctgttccctagacacacgtgtgcggcggcgcgtgacaacaccatcgacctgctgc 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ttgtgctgttccctagacacacgtgtgcggcggcgcgtgacaacaccatcgacctgctgc 247
Query: 976 atatgttccgcgactaccttcactaccacatcaagtgttccaaggtgtacgttcactccc 1035
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 248 atatgttccgcgactaccttcactaccacatcaagtgttccaaggtgtacgtccactccc 307
Query: 1036 gtatgcgcgccaaggccggtgatctgttgaaggtgctgaaccgcgctcggccgcagtcca 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gtatgcgcgccaaggccggtgatctgttgaaggtgctgaaccgcgctcggccgcagtcca 367
Query: 1096 ccggccgtcccacggagcggaagaccatcactgggagaacgttcgtgaggcgagattgag 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ccggccgtcccacggagcggaagaccatcactgggagaacgttcgtgaggcgagattgag 427
Query: 1156 tgttgcgggtgggcggctcgtagacgtctcgtagacgtcgtagaggccgctcggctacgg 1215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgttgcgggtgggcggctcgtagacgtctcgtagacgtcgtagaggccgctcggctacgg 487
Query: 1216 ctgacgtcacacccgcctgttcatagactgttcgtagaccgaccacactccatgacgttc 1275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ctgacgtcacacccgcctgttcatagactgttcgtagaccgaccacactccatgacgttc 547
Query: 1276 agtgtgaccgtagccgagtgatcgtagcatgtgacgctgacagatatcctatcagaacgg 1335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 agtgtgaccgtagccgagtgatcgtagcatgtgacgctgacagatatcctatcagaacgg 607
Query: 1336 acgcgtttttcacgttaagccggcaatgtgcgtatttcctatgtatacactgtgttatat 1395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 acgcgtttttcacgttaagccggcaatgtgcgtatttcctatgtatacactgtgttatat 667
Query: 1396 atttcattgggtatatatgaaatgtgtacaagcgtaatgttactaaacgtcgtcacaaac 1455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 atttcattgggtatatatgaaatgtgtacaagcgtaatgttactaaacgtcgtcacaaac 727
Query: 1456 caataccgatgttagcttccgttcccatactaattaattgtgaatcgccaaatgttatgc 1515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 caataccgatgttagcttccgttcccatactaattaattgtgaatcgccaaatgttatgc 787
Query: 1516 tcaatattcggtatgttgtgtcg 1538
|||||||||||||||||||||||
Sbjct: 788 tcaatattcggtatgttgtgtcg 810
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 184,899
Number of extensions: 8777
Number of successful extensions: 8777
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8775
Number of HSP's successfully gapped: 1
Length of query: 1654
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1637
Effective length of database: 8,119,229
Effective search space: 13291177873
Effective search space used: 13291177873
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)