BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20973 (UTR included)
(2206 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2641_C1 1574 0.0
>BF14_2641_C1
Length = 1282
Score = 1574 bits (794), Expect = 0.0
Identities = 800/802 (99%)
Strand = Plus / Plus
Query: 445 atatggcttcaaacggtgatattgaaagtctagatgctagcggcaaaatcattaaaatgg 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 atatggcttcaaacggtgatattgaaagtctagatgctagcggcaaaatcattaaaatgg 131
Query: 505 aagtggactacagtgccacttgcgatgagaaaataccattatggaaatcctgggcttcta 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 aagtggactacagtgccacttgcgatgagaaaataccattatggaaatcctgggcttcta 191
Query: 565 atggaaaagtgcaggaggctatagatcagctactggctttggaaaaacaaacaaggactg 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 192 atggaaaagtgcaggaggctatagatcagctactggctttggaaaaacaaacaagaactg 251
Query: 625 ctgctgatatggcctccactgcaaggattctggtcacaatagtacagatctgtttcgagg 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ctgctgatatggcctccactgcaaggattctggtcacaatagtacagatctgtttcgagg 311
Query: 685 ccaagaactggactgctcttaatgatcacatcattcttctttcaaagagaaggtcacagt 744
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ctaagaactggactgctcttaatgatcacatcattcttctttcaaagagaaggtcacagt 371
Query: 745 taaaacaagctgttgtgaaaatggttcaagaatgctatacatatgtaaacaagaccccgg 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 taaaacaagctgttgtgaaaatggttcaagaatgctatacatatgtaaacaagaccccgg 431
Query: 805 ataaagagactaaaataaaactcatagaaaccctcagaactataacggaaggaaaaatct 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ataaagagactaaaataaaactcatagaaaccctcagaactataacggaaggaaaaatct 491
Query: 865 atgtagaagtggaaagggcccgtctgactcatatcttggccaaaatgcgcgaagaagaaa 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 atgtagaagtggaaagggcccgtctgactcatatcttggccaaaatgcgcgaagaagaaa 551
Query: 925 acaatatagcagaagctgcaaagataatacaagaattacaagttgaaacttacggctcta 984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 acaatatagcagaagctgcaaagataatacaagaattacaagttgaaacttacggctcta 611
Query: 985 tggataagagagagaaagtagagcttatattggagcagatgaggctgtgtctagccatca 1044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tggataagagagagaaagtagagcttatattggagcagatgaggctgtgtctagccatca 671
Query: 1045 aagattatatccgtacacagattatctcaaagaagataaacacaaaattctttgaggaag 1104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 aagattatatccgtacacagattatctcaaagaagataaacacaaaattctttgaggaag 731
Query: 1105 atgatactcaggagctaaaagagaaattctaccgactcatgatagctgttgatcaacaaa 1164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 atgatactcaggagctaaaagagaaattctaccgactcatgatagctgttgatcaacaaa 791
Query: 1165 atggtcaatatctctcagtgtgccgtcatttccgagctctcggacaagctggcggggcag 1224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 atggtcaatatctctcagtgtgccgtcatttccgagctctcggacaagctggcggggcag 851
Query: 1225 atgctctgattggtagtgtggt 1246
||||||||||||||||||||||
Sbjct: 852 atgctctgattggtagtgtggt 873
Score = 603 bits (304), Expect = e-172
Identities = 310/312 (99%)
Strand = Plus / Plus
Query: 1247 acaacttctcggtttattcataactccggagatcataagatggaatacattatgctccac 1306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 967 acaacttctcggtttattcataactccggagatcataagatggaatacattatgctccac 1026
Query: 1307 ctatgagaagatgctgagaacaactcccttcttccagagcaatgatgagaaaggtcaaga 1366
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1027 ctacgagaagatgctgagaacaactcccttcttccagagcaatgatgagaaaggtcaaga 1086
Query: 1367 gcgttggaatgacctcaagaatagagttgtcgaacataatatccgcatcatgtcaatgta 1426
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1087 gcgttggaatgacctcaaaaatagagttgtcgaacataatatccgcatcatgtcaatgta 1146
Query: 1427 ctacactcgtataacgatccaacgtatgagtgagcttctcggtcttagcgtcactgagac 1486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1147 ctacactcgtataacgatccaacgtatgagtgagcttctcggtcttagcgtcactgagac 1206
Query: 1487 agaggacgccttgagtcaattagtggtgagcgcggtggtgaaagccaagatagaccgacc 1546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1207 agaggacgccttgagtcaattagtggtgagcgcggtggtgaaagccaagatagaccgacc 1266
Query: 1547 agccggcgtcgt 1558
||||||||||||
Sbjct: 1267 agccggcgtcgt 1278
Score = 141 bits (71), Expect = 5e-33
Identities = 71/71 (100%)
Strand = Plus / Plus
Query: 283 aattacacaaaagtaaacttgtaaactgcctaatagcgaattattcagcggaaaaatatt 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aattacacaaaagtaaacttgtaaactgcctaatagcgaattattcagcggaaaaatatt 60
Query: 343 taaaaacaaca 353
|||||||||||
Sbjct: 61 taaaaacaaca 71
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 295,223
Number of extensions: 6879
Number of successful extensions: 6879
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6879
Number of HSP's successfully gapped: 3
Length of query: 2206
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2189
Effective length of database: 8,119,229
Effective search space: 17772992281
Effective search space used: 17772992281
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)