BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20977 (UTR included)
(3346 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01052A1C06 1542 0.0
>BF01052A1C06
Length = 806
Score = 1542 bits (778), Expect = 0.0
Identities = 799/806 (99%)
Strand = Plus / Plus
Query: 1630 gaagcacggacagcttggctcgtaattccctgcttgctgcacaggtgcttcgtctgatac 1689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaagcacggacagcttggctcgtaattccctgcttgctgcacaggtgcttcgtctgatac 60
Query: 1690 ccactcaagaggcacggcaaagaaattacttgtatgggagactagcatctcattccttgc 1749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccactcaagaggcacggcaaagaaattacttgtatgggagactagcatctcattccttgc 120
Query: 1750 ttggcgctgcagagttggaacatgtgtttccagatagagaagtgaaaatatttgtgggta 1809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttggcgctgcagagttggaacatgtgtttccagatagagaagtgaaaatatttgtgggta 180
Query: 1810 catggaatatgaatggccaagcaccaccaaaagaattagcagatttcatatttccgaacg 1869
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 181 catggaatatgaatggccaagcaccaccgaaagaattagcagatttcatatttccgaatg 240
Query: 1870 aagtgaagcatgttcctgatatatttgccatcggcactcaagagtcatactccgaaagga 1929
||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 241 aagtgaagcatgttcctgatatattcgccatcggcactcaagagtcgtactccgaaagga 300
Query: 1930 cggaatgggagattactatacaagaagttctgggaccttcgcatcttctgctacattctt 1989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cggaatgggagattactatacaagaagttctgggaccttcgcatcttctgctacattctt 360
Query: 1990 actatttaggaacaatacatctaacagtattcgtgaggagggatctcatctggttttgtt 2049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 actatttaggaacaatacatctaacagtattcgtgaggagggatctcatctggttttgtt 420
Query: 2050 cgttaccagaagacgctagtttgtcagtccgtcccggaacagcgttcaggactaagggtg 2109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cgttaccagaagacgctagtttgtcagtccgtcccggaacagcgttcaggactaagggtg 480
Query: 2110 ccgtagccatatcgtttgctctattcggctcgacgtttctgttcgtgacagcacatttga 2169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccgtagccatatcgtttgctctattcggctcgacgtttctgttcgtgacagcacatttga 540
Query: 2170 cggcacaccaggaaaaagttaaagagagactgtcggatataaagaggatcatcagatcta 2229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cggcacaccaggaaaaagttaaagagagactgtcggatataaagaggatcatcagatcta 600
Query: 2230 ttgacctaccaaagaatttgccctgcaggcatcgcagtaaagatgtcacaaataattttg 2289
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 601 ttgacctaccaaagaatttgccctgcaggcatcggagtaaagatgtcacaaataattttg 660
Query: 2290 attatgtcttctggtgtggtgacctaaactttagactcggtgaaccaagagcagccgttc 2349
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 661 attatgtcttctggtgtggtgacctaaactttagactcggtgaaccaagagcagctgttc 720
Query: 2350 tgagatggatagaacaaacaaaattccctctaccgcctcacctacctcacggtctgctac 2409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tgagatggatagaacaaacaaaattccctctaccgcctcacctacctcacggtctgctac 780
Query: 2410 atgcggatcagttgacagcagtgctc 2435
||||||||||||| ||||||||||||
Sbjct: 781 atgcggatcagttaacagcagtgctc 806
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 392,400
Number of extensions: 8684
Number of successful extensions: 8684
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8684
Number of HSP's successfully gapped: 1
Length of query: 3346
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3328
Effective length of database: 8,109,745
Effective search space: 26989231360
Effective search space used: 26989231360
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)