BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20994 (UTR included)
(2089 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047B2H03 109 2e-23
BF14_335_C2 105 3e-22
BF14_335_C4 96 3e-19
BF01060B1D11 94 1e-18
BF01043B1E03 90 2e-17
BF01037A2H12 86 3e-16
BF01056B1D01 82 4e-15
BF01055B2A04 70 2e-11
>BF01047B2H03
Length = 758
Score = 109 bits (55), Expect = 2e-23
Identities = 150/179 (83%), Gaps = 2/179 (1%)
Strand = Plus / Minus
Query: 1231 gttttgtgagagaaggcactaaggctacaaaatcaaacgtcaagccttactctattttta 1290
||||||||||||||| || || ||||| ||| |||||| |||||||||||||||| |||
Sbjct: 179 gttttgtgagagaagacattagggctataaagtcaaacatcaagccttactctatcctta 120
Query: 1291 aagcggcttcggattgggcttttatgatggacacatatgagaagcaatacaagatcccag 1350
|||||| ||||||||| || | || ||||| || |||| | | | |||||| ||||| |
Sbjct: 119 aagcggtttcggattgcactataatcatggatacgtatggggaacgatacaaaatccccg 60
Query: 1351 aggatatttgtgcgtcggcctccagaccggacatatttt-tatattcgcgaattttaaa 1408
|| ||| ||||| ||||| |||||||| |||||||||| |||||||||||||||||||
Sbjct: 59 agcata-ttgtgtgtcggtttccagaccagacatattttatatattcgcgaattttaaa 2
Score = 83.8 bits (42), Expect = 1e-15
Identities = 72/82 (87%)
Strand = Plus / Minus
Query: 1112 aacttgctacatccgcagggacgcagttggaattgctaaacatttgctggtgggatgtag 1171
||||||||| ||| || ||| ||||||||||||||| | ||||||||| ||||||||||
Sbjct: 365 aacttgctatatctgcgaggaggcagttggaattgctgagcatttgctgatgggatgtag 306
Query: 1172 ggtactcctggattgcggtcaa 1193
| ||||||||||| ||||||||
Sbjct: 305 gctactcctggatagcggtcaa 284
>BF14_335_C2
Length = 1827
Score = 105 bits (53), Expect = 3e-22
Identities = 124/146 (84%), Gaps = 5/146 (3%)
Strand = Plus / Minus
Query: 1556 gaggtataacagccaaatctct--acaacctgctaaaagacttaggcctgccaagaacta 1613
||||||||||||| |||||||| ||| ||| |||||| |||| |||||| | |||||||
Sbjct: 1105 gaggtataacagctaaatctctctacagcctactaaaatacttgggcctgtccagaacta 1046
Query: 1614 acatctgttcattcttggaacgtgcgtcgatggcagccctggtaggttcgtttcatattt 1673
||| | |||||||||| |||||| | |||| | |||| || |||||||||||||| ||||
Sbjct: 1045 acaccagttcattcttcgaacgtacttcgaagacagctctagtaggttcgtttcaaattt 986
Query: 1674 ggttaggtagagagaggagcttggac 1699
|||||| |||||||||||||||||
Sbjct: 985 ggttag---gagagaggagcttggac 963
Score = 103 bits (52), Expect = 1e-21
Identities = 103/120 (85%)
Strand = Plus / Minus
Query: 1381 acatatttttatattcgcgaattttaaaccgcgttgtactaatagagctcacggttcctt 1440
|||||||| | ||||||||||||||||| |||| | |||||||||| ||||||||||
Sbjct: 1277 acatatttctgtattcgcgaattttaaagcgcgctacgctaatagagcctacggttcctt 1218
Query: 1441 gggaacccaacatcccgaaagaccatgtcatcaaagtcaacaagtattacgagctcacta 1500
|| | |||||||||| ||| |||||| |||||| |||||||||||||| ||||||||||
Sbjct: 1217 ggaagaccaacatccccaaaaaccatgccatcaaggtcaacaagtattatgagctcacta 1158
>BF14_335_C4
Length = 1491
Score = 95.6 bits (48), Expect = 3e-19
Identities = 69/76 (90%)
Strand = Plus / Plus
Query: 1623 cattcttggaacgtgcgtcgatggcagccctggtaggttcgtttcatatttggttaggta 1682
||||||||||||||| ||| | ||||||||| | ||| ||| ||||||||||||||||||
Sbjct: 1135 cattcttggaacgtgagtctaaggcagccctagcaggatcgattcatatttggttaggta 1194
Query: 1683 gagagaggagcttgga 1698
||||||||||||||||
Sbjct: 1195 gagagaggagcttgga 1210
>BF01060B1D11
Length = 799
Score = 93.7 bits (47), Expect = 1e-18
Identities = 99/116 (85%), Gaps = 4/116 (3%)
Strand = Plus / Minus
Query: 1066 tcccagatcagagtaatttagtaaga----tggggcaaaggtaccgaaaaaacttgctac 1121
|||||||||||||||||||||||||| |||| |||| ||||||||||||||||||
Sbjct: 234 tcccagatcagagtaatttagtaagacgggaggggtaaagataccgaaaaaacttgctat 175
Query: 1122 atccgcagggacgcagttggaattgctaaacatttgctggtgggatgtagggtact 1177
|| || | | ||||||||||||||||| ||||||||| ||||||||||| ||||
Sbjct: 174 atttgcgagaaggcagttggaattgctaagcatttgctgatgggatgtaggctact 119
>BF01043B1E03
Length = 830
Score = 89.7 bits (45), Expect = 2e-17
Identities = 125/150 (83%), Gaps = 5/150 (3%)
Strand = Plus / Plus
Query: 1554 gcgaggtataacagc--caaatctctacaacctgctaaaagacttaggcctgccaagaac 1611
||||||||||||||| || |||||||||||| || ||| |||| ||||||| |||||
Sbjct: 211 gcgaggtataacagcttcatctctctacaacctactgaaacacttgagcctgcccagaac 270
Query: 1612 taacatctgttcattcttggaacgtgcgtcgatggcagccctggtaggttcgtttcatat 1671
||||||| ||||||||||||||| | | | ||||| ||| ||||| |||||| ||
Sbjct: 271 taacatcaaatcattcttggaacgtactgcaaaggcaggcct---aggtttgtttcaaat 327
Query: 1672 ttggttaggtagagagaggagcttggacag 1701
|||||||||||||||||||| |||||||||
Sbjct: 328 ttggttaggtagagagaggaccttggacag 357
>BF01037A2H12
Length = 773
Score = 85.7 bits (43), Expect = 3e-16
Identities = 95/109 (87%), Gaps = 5/109 (4%)
Strand = Plus / Plus
Query: 1525 ttgtaaatttgtacgcgatagaagtaggagcgag--gtataacagccaaatctct--aca 1580
|||| |||||||||| | || ||||||||||||| |||||| |||||||||||| |||
Sbjct: 666 ttgtgaatttgtacgaggtaaaagtaggagcgagaggtataaaagccaaatctctcgaca 725
Query: 1581 acctgctaaaagacttaggcctgccaagaactaacatctgttcattctt 1629
|||||||||||||||| | | |||||||| |||||||| ||||||||||
Sbjct: 726 acctgctaaaagactt-gccttgccaagagctaacatcagttcattctt 773
>BF01056B1D01
Length = 838
Score = 81.8 bits (41), Expect = 4e-15
Identities = 112/133 (84%), Gaps = 7/133 (5%)
Strand = Plus / Minus
Query: 965 ggagattttgtgcatcccattagcactaaaatggcgcactttaa-ttcatgattggtcgc 1023
||||||||| ||| ||||| |||||| ||| | || |||||||| || ||||||||| ||
Sbjct: 190 ggagatttt-tgcgtcccaatagcacaaaagtagcccactttaaatttatgattggttgc 132
Query: 1024 cagcactactaaa-----attttacctcaatgcgttccaaatgactctcccagatcagag 1078
||||||| ||||| |||||| || ||||||||||||||||||| ||| |||||||
Sbjct: 131 cagcactgctaaattaaaattttatcttgatgcgttccaaatgactcttccaaatcagag 72
Query: 1079 taatttagtaaga 1091
|||||||||||||
Sbjct: 71 taatttagtaaga 59
>BF01055B2A04
Length = 830
Score = 69.9 bits (35), Expect = 2e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 1557 aggtataacagccaaatctctacaacctgctaaaagacttaggcctg 1603
|||||||||||| ||||||||||||||| ||||||||||| ||||||
Sbjct: 414 aggtataacagctaaatctctacaacctactaaaagacttgggcctg 368
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 237,368
Number of extensions: 5055
Number of successful extensions: 5055
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 5049
Number of HSP's successfully gapped: 10
Length of query: 2089
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2072
Effective length of database: 8,119,229
Effective search space: 16823042488
Effective search space used: 16823042488
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)