BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20997 (UTR included)
(7779 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1839_C1 1253 0.0
BF14_3243_C1 159 8e-38
>BF14_1839_C1
Length = 1302
Score = 1253 bits (632), Expect = 0.0
Identities = 663/674 (98%), Gaps = 7/674 (1%)
Strand = Plus / Plus
Query: 7106 atgggtgacacgttcccgaccccgtccccggagtcccccgaccactggtccacgccgtcc 7165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgggtgacacgttcccgaccccgtccccggagtcccccgaccactggtccacgccgtcc 60
Query: 7166 ccccagaccccgctcacgcagtccccccactccgactggtcggaccgcgccgccctctcc 7225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccccagaccccgctcacgcagtccccccactccgactggtcggaccgcgccgccctctcc 120
Query: 7226 cccaacgacatacaacagacaaacaaaggcgcgaccgacgccttctatatataaacgacg 7285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cccaacgacatacaacagacaaacaaaggcgcgaccgacgccttctatatataaacgacg 180
Query: 7286 agcgcactcctcactcatgacgcggataggaaattaaattgttgaattatcgaacgcaaa 7345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agcgcactcctcactcatgacgcggataggaaattaaattgttgaattatcgaacgcaaa 240
Query: 7346 tgtttgtaattaaaatattagtatagactgacgctgcgtgacggcggacagcttgcagct 7405
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgtttgtaattaaaatattagtatagactgacgctgcgtgacggcggacagcttgcagc- 299
Query: 7406 tacagctaaccgagcttatgatggacgtgcgtcgatagctgaatagttcgcgaggagaac 7465
||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 300 ------taaccgagcttatgatggaagtgcgtcgatagctgaattgttcgcgaggagaac 353
Query: 7466 tcgaggtgctagtgccgtggagagccgtggatagactgatttgtatagccatgacttatt 7525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 tcgaggtgctagtgccgtggagagccgtggatagactgatttgtatagccatgacttatt 413
Query: 7526 ttagagaaaatttatatgacatacccatgacacaagtcgcttggttgatactgcgagata 7585
|||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 414 ttagagaaaatttatatgacgtacccatgacacaagttgcttggttgatactgcgagata 473
Query: 7586 ttcattatagtttctatagcaccgccatgacatgccgcgtgaccagccctcacccgcgcc 7645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 ttcattatagtttctatagcaccgccatgacatgccgcgtgaccagccctcacccgcgcc 533
Query: 7646 cttgttattgttaaatcctcttttattgtttaaaacgtgttttaaaaatatttaaaaatg 7705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 cttgttattgttaaatcctcttttattgtttaaaacgtgttttaaaaatatttaaaaatg 593
Query: 7706 ggaattatgtatccacttatgagattgttttgcgttctgacgtgaaaggaaattatttat 7765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 ggaattatgtatccacttatgagattgttttgcgttctgacgtgaaaggaaattatttat 653
Query: 7766 gtgtgattctttag 7779
||||||||||||||
Sbjct: 654 gtgtgattctttag 667
>BF14_3243_C1
Length = 1035
Score = 159 bits (80), Expect = 8e-38
Identities = 80/80 (100%)
Strand = Plus / Minus
Query: 1 tgatggtttagttaacgtcaaaactactttaaataaaaacgttagttctgttctgcacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 947 tgatggtttagttaacgtcaaaactactttaaataaaaacgttagttctgttctgcacta 888
Query: 61 aatagcgttgttttattata 80
||||||||||||||||||||
Sbjct: 887 aatagcgttgttttattata 868
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 73,622
Number of extensions: 7792
Number of successful extensions: 7792
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7792
Number of HSP's successfully gapped: 3
Length of query: 7779
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 7761
Effective length of database: 8,109,745
Effective search space: 62939730945
Effective search space used: 62939730945
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)