BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21000 (UTR included)
(1495 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2779_C1 1130 0.0
>BF14_2779_C1
Length = 810
Score = 1130 bits (570), Expect = 0.0
Identities = 586/590 (99%), Gaps = 1/590 (0%)
Strand = Plus / Plus
Query: 346 agcaaatatcgttaaataatagcggaaattaccacgtttttctgatcgaatgcattcaaa 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcaaatatcgttaaataatagcggaaattaccacgtttttctgatcgaatgcattcaaa 60
Query: 406 aagtttctgcgaacgctttattttttcgtttacttttaattagtcttaagctaagataac 465
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 61 aagtttctgcgaacgctttattttttcgtttactct-aattagtcttaagctaagataac 119
Query: 466 gggtggtacaaaaacacttaaagtgtgtgtaaagtatggtgcgtggtgccagcagaggcg 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 gggtggtacaaaaacacttaaagtgtgtgtaaagtatggtgcgtggtgccagcagaggcg 179
Query: 526 gacgtggtatgccggggagagctggaatgggccgcccgccctttaatagacctcgcgttt 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 gacgtggtatgccggggagagctggaatgggccgcccgccctttaatagacctcgcgttt 239
Query: 586 taatgctgaggccgcccttcgacttgatcctagctgaaccatccttccccagatgcaaac 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 taatgctgaggccgcccttcgacttgatcctagctgaaccatccttccccagatgcaaac 299
Query: 646 cagcgcctgacgactcagcgttaacacaagctctcctgaagaggcatgctgagttatgtc 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 cagcgcctgacgactcagcgttaacacaagctctcctgaagaggcatgctgagttatgtc 359
Query: 706 cgacaccagcagaacagtctgctgtactcagtctcgtcaccaaactgcagacagtattgg 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 cgacaccagcagaacagtctgctgtactcagtctcgtcaccaaactgcagacagtattgg 419
Query: 766 ataacctggttgtagctcccggagacttcgcagcatgtcaattagaggaggtgagacaag 825
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 420 ataacctggttgtagctcccggagacttcgcagcatgtcaattggaggaggtgagacaag 479
Query: 826 tcggctcatacaagaaggggacgatgatggccggcaagaacttggctgatatagttgtca 885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 tcggctcatacaagaaggggacgatgatggccggcaagaacttggctgatatagttgtca 539
Query: 886 taatgaaaacactacccaccaaggaggctgtagagggcttgtctaataag 935
||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 540 taatgaaaacactacccaccaaggaagctgtagagggcttgtctaataag 589
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 299,503
Number of extensions: 10178
Number of successful extensions: 10178
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10177
Number of HSP's successfully gapped: 1
Length of query: 1495
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1478
Effective length of database: 8,119,229
Effective search space: 12000220462
Effective search space used: 12000220462
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)