BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21013 (UTR included)
(1552 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_189_C1 1552 0.0
>BF14_189_C1
Length = 840
Score = 1552 bits (783), Expect = 0.0
Identities = 793/795 (99%), Gaps = 1/795 (0%)
Strand = Plus / Plus
Query: 530 agacacaaccagagctcagaaaccgagtgaacagaacggtaaagactatgtgtttgtggc 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 agacacaaccagagctcagaaaccgagtgaacagaacggtaaagactatgtgtttgtggc 105
Query: 590 gcgggagaaaatggaacagaatattgctgaagggaagtttatagagcacggcgagtacaa 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 gcgggagaaaatggaacagaatattgctgaagggaagtttatagagcacggcgagtacaa 165
Query: 650 ggggaatttatacggaacatcagcggagagtgtggagacgattgtgaattcagggcgtgt 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 ggggaatttatacggaacatcagcggagagtgtggagacgattgtgaattcagggcgtgt 225
Query: 710 ctgtgttttgagcccccactggcaggccttgaagatgttgcgtacgccgcggttgcgacc 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 ctgtgttttgagcccccactggcaggccttgaagatgttgcgtacgccgcggttgcgacc 285
Query: 770 ttatattgtatttatcaagccacccctgctcgaaaggctaatcgaaacaagaactgcggc 829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ttatattgtatttatcaagccacccctgctcgaaaggctaatcgaaacaagaactgcggc 345
Query: 830 gagtgctcgttcgacgtttgacaaagaaa-gctctagggcatttacggaggaggagtttg 888
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 346 gagtgctcgttcgacgtttgacaaagaaaagctctagggcatttacggaggaggagtttg 405
Query: 889 cggatattatacggtcgtcgaatcggattaactttttgtacggatatatgtttgatgagg 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 cggatattatacggtcgtcgaatcggattaactttttgtacggatatatgtttgatgagg 465
Query: 949 agattgtcaacgctgatctggcaacggccctgactcagctgctgcgggcggcgtggcggg 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 agattgtcaacgctgatctggcaacggccctgactcagctgctgcgggcggcgtggcggg 525
Query: 1009 tgcagtccgagccgctgtgggttccagcttcgtgggtgcagtgagatgtctggtcccttc 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 tgcagtccgagccgctgtgggttccagcttcgtgggtgcagtgagatgtctggtcccttc 585
Query: 1069 tagtccaatttttagcccaattatacattattttcatattatgttctaagtatttaattt 1128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 tagtccaatttttagcccaattatacattattttcatattatgttctaagtatttaattt 645
Query: 1129 ttagtgtttagttacgcgtagcgatttaatttcaattatatatctgtaaatatgtatata 1188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 ttagtgtttagttacgcgtagcgatttaatttcaattatatatctgtaaatatgtatata 705
Query: 1189 tttatgtgttgttgatgtttacatataatttgtgcattcttgtctttgcggtaatgtcta 1248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 tttatgtgttgttgatgtttacatataatttgtgcattcttgtctttgcggtaatgtcta 765
Query: 1249 cttgctgccctttttccgcggtgtctaccgttttgtctatttatgtgcctctaataatat 1308
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 cttgctgccctttttccacggtgtctaccgttttgtctatttatgtgcctctaataatat 825
Query: 1309 cgatgttatggtagt 1323
|||||||||||||||
Sbjct: 826 cgatgttatggtagt 840
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 260,351
Number of extensions: 7151
Number of successful extensions: 7151
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7150
Number of HSP's successfully gapped: 1
Length of query: 1552
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1535
Effective length of database: 8,119,229
Effective search space: 12463016515
Effective search space used: 12463016515
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)