BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21033 (UTR included)
(1237 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1847_C1 500 e-141
BF01025B1E11 190 4e-48
BF14_2430_C1 149 1e-35
BF01051A1D12 103 7e-22
BF14_1645_C1 100 1e-20
BF14_3046_C1 88 4e-17
BF01024A2B03 86 2e-16
BF14_2947_C2 76 1e-13
>BF14_1847_C1
Length = 1163
Score = 500 bits (252), Expect = e-141
Identities = 270/276 (97%)
Strand = Plus / Plus
Query: 524 gctttgcgctgggcgatcgtcaactgactcctgtcaaggtgacagcggaggccccttgct 583
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888 gctttgcgcggggcgatcgtcaactgactcctgtcaaggtgacagcggaggccccttgct 947
Query: 584 catacaacagggtgacagattccaaatagtcggtatagtttcatggggcgtaggttgtgg 643
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 948 catacaacagggtgacagattccaaatagtcggtatagtgtcatggggcgtaggttgtgg 1007
Query: 644 aaggccgggctaccccggcgtgtacactcgcatcacacgctacttgccgtggttgcgcgc 703
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1008 aaggccgggctaccccggcgtgtacactcgcatcacacgctacttaccgtggttgcgcgc 1067
Query: 704 taatttgaaagacacgtgcctgtgtgctaattaaaatgttacttttcaaaataataaagc 763
||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 1068 taatttgaaagacacgtgcctgtgtgctaattaaaattttacttttcaaaataacaaagc 1127
Query: 764 agttttctgtcattgctcacgattatacatattttg 799
|||||||||||||||||||||||||||||||||||
Sbjct: 1128 ggttttctgtcattgctcacgattatacatattttg 1163
>BF01025B1E11
Length = 786
Score = 190 bits (96), Expect = 4e-48
Identities = 151/168 (89%), Gaps = 1/168 (0%)
Strand = Plus / Minus
Query: 336 tgcacagtatattctgccagtgtcgtgtggaatggaggagccacgatacgggattaactt 395
|||||| |||||||||||||| |||||| |||||||||| |||||| ||||||||||||
Sbjct: 240 tgcacaatatattctgccagtatcgtgtagaatggaggaaacacgatccgggattaactt 181
Query: 396 atgaatgtaataaaatttaacagcttcgactgaagtcacagttaggaactttgttagtat 455
|||||| |||||||||| ||||| |||||||||||||| ||||||||||||||||||
Sbjct: 180 ttgaatgaaataaaattttacagccccgactgaagtcacaattaggaactttgttagtag 121
Query: 456 atctaaaacaacacaaattcaattaaatgc-aaacacaggagatatat 502
||||||||||| ||||||||||||| |||| ||||| |||||||||||
Sbjct: 120 atctaaaacaagacaaattcaattagatgcaaaacataggagatatat 73
>BF14_2430_C1
Length = 830
Score = 149 bits (75), Expect = 1e-35
Identities = 105/115 (91%)
Strand = Plus / Minus
Query: 336 tgcacagtatattctgccagtgtcgtgtggaatggaggagccacgatacgggattaactt 395
|||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||
Sbjct: 204 tgcacagtatattctgccagtgtcgtgtagaatggaggaaacacgatccgggattaactt 145
Query: 396 atgaatgtaataaaatttaacagcttcgactgaagtcacagttaggaactttgtt 450
|||||| ||||| |||||||||| ||||||||||| ||| ||||||||||||||
Sbjct: 144 atgaatacaataagatttaacagcctcgactgaagtaacaattaggaactttgtt 90
>BF01051A1D12
Length = 812
Score = 103 bits (52), Expect = 7e-22
Identities = 100/116 (86%)
Strand = Plus / Minus
Query: 339 acagtatattctgccagtgtcgtgtggaatggaggagccacgatacgggattaacttatg 398
||||| ||||||||||||||||||| | || || || |||||| |||||||||||||
Sbjct: 262 acagtctattctgccagtgtcgtgtagcatagattagacacgatccgggattaacttaga 203
Query: 399 aatgtaataaaatttaacagcttcgactgaagtcacagttaggaactttgttagta 454
|||| |||||||||||||||||||||||| || |||| | |||||||||| |||||
Sbjct: 202 aatggaataaaatttaacagcttcgactggagacacaatcaggaactttggtagta 147
>BF14_1645_C1
Length = 793
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 336 tgcacagtatattctgccagtgtcgtgtggaatggaggagccacgatacgggattaactt 395
|||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||
Sbjct: 154 tgcacagtatattctgccagtgtcgtgtagaatggaggaggcacgatccgggattaactt 95
Query: 396 atgaat 401
|||||
Sbjct: 94 ttgaat 89
>BF14_3046_C1
Length = 1016
Score = 87.7 bits (44), Expect = 4e-17
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 151 ttcgcacacgaatcgtggaatattttagcaatgtcaaaatttttatttgttggacgaatt 210
||||||| ||||||||||||||||| ||||||||| ||||||||||||||| |||||
Sbjct: 1003 ttcgcactggaatcgtggaatattttgccaatgtcaacgtttttatttgttggaggaatt 944
Query: 211 ataatcttgagtactgtgtg 230
|||| || ||||||||||||
Sbjct: 943 ataaactcgagtactgtgtg 924
>BF01024A2B03
Length = 724
Score = 85.7 bits (43), Expect = 2e-16
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 160 gaatcgtggaatattttagcaatgtcaaaatttttatttgttggacgaattataatcttg 219
||||||| ||||||||| ||||||||| ||||||||||| ||||||||||||||| |
Sbjct: 303 gaatcgttgaatattttgccaatgtcaacgtttttatttgtaggacgaattataatcccg 244
Query: 220 agtactgtgtggaggagacacga 242
|||||||| ||||||| ||||||
Sbjct: 243 agtactgtttggaggaaacacga 221
>BF14_2947_C2
Length = 967
Score = 75.8 bits (38), Expect = 1e-13
Identities = 86/103 (83%)
Strand = Plus / Plus
Query: 384 cgggattaacttatgaatgtaataaaatttaacagcttcgactgaagtcacagttaggaa 443
|||||||||||| |||||| ||||| |||||||| ||||||| || |||| ||| ||
Sbjct: 5 cgggattaacttttgaatgaaataannnttaacagcctcgactgcagacacaattaagac 64
Query: 444 ctttgttagtatatctaaaacaacacaaattcaattaaatgca 486
|||||||| | |||||| |||||||| ||||||||| |||||
Sbjct: 65 ctttgttaatggatctaagacaacacagattcaattagatgca 107
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 285,640
Number of extensions: 9024
Number of successful extensions: 9024
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 9023
Number of HSP's successfully gapped: 8
Length of query: 1237
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1220
Effective length of database: 8,119,229
Effective search space: 9905459380
Effective search space used: 9905459380
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)