BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21036 (UTR included)
(1462 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01044A1H05 1160 0.0
BF01049A1F01 68 4e-11
>BF01044A1H05
Length = 621
Score = 1160 bits (585), Expect = 0.0
Identities = 612/621 (98%)
Strand = Plus / Plus
Query: 510 atagctgataacgtaaatccaaacgtttatgaaaagggttcagagcgcgaagtgactagt 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atagctgataacgtaaatccaaacgtttatgaaaagggttcagagcgcgaagtgactagt 60
Query: 570 agcgagcgagacgaagatgttgtagatgaaatagatagtagagagatatttgatcttctt 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agcgagcgagacgaagatgttgtagatgaaatagatagtagagagatatttgatcttctt 120
Query: 630 cgtaacatcaatgatccggaacatcccctcactcttgaggagctgcgggtgattgaggag 689
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgtaacatcaatgatcccgaacatcccctcactcttgaggagctgcgggtgattgaggag 180
Query: 690 agaaacatatatgtcgacaataaagataattcagtgagagtgtatttcacaccaacaatc 749
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agaaatatatatgtcgacaataaagataattcagtgagagtgtatttcacaccaacaatc 240
Query: 750 cctcactgtagcatggcaacgttaataggcctatcaatccgtgtcctgcttctccgagca 809
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 241 cctcactgtagcatggcaacgttaataggcctatcaatccgtgtcctgctcctccgagct 300
Query: 810 ctgccaagtcgctacaaagtgacagtggaagtgagcgaagggactcacgtctccgaacat 869
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctgccaagtcgctacaaagtgacggtggaagtgagcgaagggactcacgtctccgaacat 360
Query: 870 gctgtcaataaacaactagctgacaaggaacgagttgcggcggccttggagaataagaac 929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gctgtcaataaacaactagctgacaaggaacgagttgcggcggccttggagaataagaac 420
Query: 930 ttggtgcaaattatcaaccaatgtgtcgcctgaacattaacattaagattttgagtaaat 989
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 421 ttggtgcaaattatcaaccaatgtgtcgcctgaacatcaacattaagattttgagtaaat 480
Query: 990 catctggatttcatacatttgtgataaggaatatatatatatattaggttagaaataaag 1049
||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 481 catctggatttcatatatttgtgataaggaatatatatatatataaggttagaaataaag 540
Query: 1050 aaatttgaacatagtttctgtattaattggatttgaatctgtggcttatattttctcatc 1109
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 541 aaatttgaacatagtttctgtattaattggatttgaatctgtggattatattttctcatc 600
Query: 1110 attaacccggtatttacactc 1130
|||||||||||||||||||||
Sbjct: 601 attaacccggtatttacactc 621
>BF01049A1F01
Length = 770
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 1253 ctgtcaccttgtgcctcggctcgcgcctcgtctcgcgactcgtaagcgagtgtaaatccc 1312
|||| ||||||||| ||||||| ||||||||||||||||||| | ||||||| | ||||
Sbjct: 218 ctgtaaccttgtgcttcggctcacgcctcgtctcgcgactcgcacacgagtgttagtccc 159
Query: 1313 gggtaa 1318
||||||
Sbjct: 158 gggtaa 153
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 212,189
Number of extensions: 9651
Number of successful extensions: 9651
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 9649
Number of HSP's successfully gapped: 2
Length of query: 1462
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1445
Effective length of database: 8,119,229
Effective search space: 11732285905
Effective search space used: 11732285905
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)