BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21038 (UTR included)
(1438 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2147_C1 1372 0.0
BF01037B1H08 105 2e-22
BF01010B2F09 80 1e-14
>BF14_2147_C1
Length = 804
Score = 1372 bits (692), Expect = 0.0
Identities = 711/716 (99%), Gaps = 1/716 (0%)
Strand = Plus / Plus
Query: 347 atacgtcaaaacaatggttaaaactaacataagtaataagatttaaatcattttacggtg 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 atacgtcaaaacaatggttaaaactaacataagtaataagatttaaatcattttacggtg 61
Query: 407 aagtaatatttgattcacaaattgattctcgcatttaatcttcatttaatacacaattt- 465
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 62 aagtaatatttgattcacaaattgattctcgcatttaatcttcatttaacacacaattta 121
Query: 466 tgtataacagttattagcttagataataggtaaaaatgtcggagaggctaaaaaccagca 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tgtataacagttattagcttagataataggtaaaaatgtcggagaggctaaaaaccagca 181
Query: 526 atatttcaaatgaagaagtcatcgaagatttaactaaagatctagaaatgtctctaaaaa 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 atatttcaaatgaagaagtcatcgaagatttaactaaagatctagaaatgtctctaaaaa 241
Query: 586 ccggcgaaggtgattttgttgtgaaaccagacgcctctggagatgaaaagacttcatcca 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ccggcgaaggtgattttgttgtgaaaccagacgcctctggagatgaaaagacttcatcca 301
Query: 646 aagataaatcaagtaaagatattccatcagcaagtaatactttcaatgacgagacggaga 705
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aagataaatcaagtaaagatgttccatcagcaagtaatactttcaatgacgagacggaga 361
Query: 706 tagacagtaaatatgaagatagcgacaaagaaagcgattcagactcaatagatgagacat 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tagacagtaaatatgaagatagcgacaaagaaagcgattcagactcaatagatgagacat 421
Query: 766 ctctcaaagatgctgaaatgaatctgacagaagatgagaaagctgaacggcaggtgatcg 825
||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 422 ctctcaaagatgctgaaatgaatctaacagaagacgagaaagctgaacggcaggtgatcg 481
Query: 826 ccgaggagttgaagagggcaggcaacgaagcattcaaggtcggagactttgataggagca 885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ccgaggagttgaagagggcaggcaacgaagcattcaaggtcggagactttgataggagca 541
Query: 886 tagagaaatatactgaagccctccgtatatgtcccctacaatacacaacacagcgtgcca 945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tagagaaatatactgaagccctccgtatatgtcccctacaatacacaacacagcgtgcca 601
Query: 946 tactgtactgcaacaggagcgcctcaaagatgaagttggagaggtacaagcaggcgatca 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tactgtactgcaacaggagcgcctcaaagatgaagttggagaggtacaagcaggcgatca 661
Query: 1006 aagactgcaccagggccgtggagctcgacgatacataccttaaggcctattacagg 1061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 aagactgcaccagggccgtggagctcgacgatacataccttaaggcctattacagg 717
>BF01037B1H08
Length = 758
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 1366 aagtcgtgttggcctggaggttaaaggcccgcctctcacacgtgagggcgcgggttcgaa 1425
||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 69 aagtcgttgtggcctggaggttaaaggcccgcctctcatacgtgaaggcgcgggttcgaa 128
Query: 1426 acctggcgagtac 1438
||||||| |||||
Sbjct: 129 acctggcaagtac 141
>BF01010B2F09
Length = 764
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 1379 ctggaggttaaaggcccgcctctcacacgtgagggcgcgggttcgaaacctg 1430
|||||||||||||||| ||||||||||||||| | |||||||||||||||||
Sbjct: 539 ctggaggttaaaggccagcctctcacacgtgaagtcgcgggttcgaaacctg 488
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 223,836
Number of extensions: 6036
Number of successful extensions: 6036
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 6035
Number of HSP's successfully gapped: 3
Length of query: 1438
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1421
Effective length of database: 8,119,229
Effective search space: 11537424409
Effective search space used: 11537424409
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)