BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21052 (UTR included)
(3028 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054B2A04 1451 0.0
>BF01054B2A04
Length = 747
Score = 1451 bits (732), Expect = 0.0
Identities = 735/736 (99%)
Strand = Plus / Plus
Query: 613 ccggcggacacgaggactgcgtgcgggcgctgctcgataacggggccaatgtagaagatc 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 ccggcggacacgaggactgcgtgcgggcgctgctcgataacggggccaatgtagaagatc 71
Query: 673 acaacgaaaacggtcacacgccgctcatggaggccgcatcagccggtcacgtgggcgtcg 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 acaacgaaaacggtcacacgccgctcatggaggccgcatcagccggtcacgtgggcgtcg 131
Query: 733 cgaagatcttgctggagcacggcgccggcatcaacacgcactccaacgagttcaaggagt 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 cgaagatcttgctggagcacggcgccggcatcaacacgcactccaacgagttcaaggagt 191
Query: 793 ccgccctcacgctcgcatgctacaagggtcacctggacatggtcaggttcctgttggcgg 852
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ccgccctcaccctcgcatgctacaagggtcacctggacatggtcaggttcctgttggcgg 251
Query: 853 ccggcgccgaccgcgagcacaagactgacgagatgcacaccgccctcatggaggccagca 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ccggcgccgaccgcgagcacaagactgacgagatgcacaccgccctcatggaggccagca 311
Query: 913 tggacggacacgtcgaggtcgcccggctgctgttggactctggagcacaggttaacatgc 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tggacggacacgtcgaggtcgcccggctgctgttggactctggagcacaggttaacatgc 371
Query: 973 cgacggacagtttcgagtctccgctgaccctggcggcgtgcgggggacacgtggagctgg 1032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 cgacggacagtttcgagtctccgctgaccctggcggcgtgcgggggacacgtggagctgg 431
Query: 1033 ctatgttgctgttggagagaggcgccaacatagaagaagtcaacgacgagggatacacgc 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ctatgttgctgttggagagaggcgccaacatagaagaagtcaacgacgagggatacacgc 491
Query: 1093 cgctcatggaggcagctagggaaggtcacgaggagatggtggcgctgctgctcggtcagg 1152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 cgctcatggaggcagctagggaaggtcacgaggagatggtggcgctgctgctcggtcagg 551
Query: 1153 gcgcgtccatcaacgctcagaccgacgagacgcaggagacggccctcaccctggcctgct 1212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 gcgcgtccatcaacgctcagaccgacgagacgcaggagacggccctcaccctggcctgct 611
Query: 1213 gcggcggcttcctcgaggtggcggacttcctcatcaaggcgggggcggatgcggaactgg 1272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gcggcggcttcctcgaggtggcggacttcctcatcaaggcgggggcggatgcggaactgg 671
Query: 1273 gagcttccacgccgctcatggaggcctcgcaggaaggacacctggagctcgtacgatacc 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gagcttccacgccgctcatggaggcctcgcaggaaggacacctggagctcgtacgatacc 731
Query: 1333 tgctgcaagccggcgc 1348
||||||||||||||||
Sbjct: 732 tgctgcaagccggcgc 747
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 252,924
Number of extensions: 5371
Number of successful extensions: 5371
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5361
Number of HSP's successfully gapped: 1
Length of query: 3028
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3010
Effective length of database: 8,109,745
Effective search space: 24410332450
Effective search space used: 24410332450
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)