BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21095 (UTR included)
(1405 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01059A1A12 819 0.0
BF01027A1E11 436 e-122
BF14_736_C1 84 7e-16
BF01026A1A12 82 3e-15
BF01059B2F03 80 1e-14
BF01031B1D09 80 1e-14
BF01054B2B08 72 3e-12
BF14_2467_C1 72 3e-12
>BF01059A1A12
Length = 446
Score = 819 bits (413), Expect = 0.0
Identities = 416/417 (99%)
Strand = Plus / Plus
Query: 513 cctgtttatagacccacaatcgtcaaaaagaggacgaaaagattcatcagacatcaatct 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctgtttatagacccacaatcgtcaaaaagaggacgaaaagattcatcagacatcaatct 60
Query: 573 gatcgctatgacaaacttaagcgtaactggcgtaaacccagaggtattgacaacagagtg 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatcgctatgacaaacttaagcgtaactggcgtaaacccagaggtattgacaacagagtg 120
Query: 633 cgcaggcgttttaagggccagtacttgatgcccagcattggttacggatcaaacaagaag 692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgcaggcgttttaagggccagtacttgatgcccagcattggttacggatcaaacaagaag 180
Query: 693 acccgtcacatgctacctaatggattccgtaaggtgttagtccacaacgtccgtgagctg 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acccgtcacatgctacctaatggattccgtaaggtgttagtccacaacgtccgtgagctg 240
Query: 753 gaaatcctcatgatgcagaataggaagtactgcgccgagatcgcccacgccgtctcctcc 812
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaaatcctcatgatgcagaacaggaagtactgcgccgagatcgcccacgccgtctcctcc 300
Query: 813 aagaagcggaaggctatagtggaacgagcccagcagctcagcatcagggtgacaaacgct 872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagaagcggaaggctatagtggaacgagcccagcagctcagcatcagggtgacaaacgct 360
Query: 873 gcagcgcgcctccgcagccaggagaacgaataactttaattatatgttacatataaa 929
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcagcgcgcctccgcagccaggagaacgaataactttaattatatgttacatataaa 417
>BF01027A1E11
Length = 674
Score = 436 bits (220), Expect = e-122
Identities = 220/220 (100%)
Strand = Plus / Plus
Query: 509 cagacctgtttatagacccacaatcgtcaaaaagaggacgaaaagattcatcagacatca 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagacctgtttatagacccacaatcgtcaaaaagaggacgaaaagattcatcagacatca 60
Query: 569 atctgatcgctatgacaaacttaagcgtaactggcgtaaacccagaggtattgacaacag 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atctgatcgctatgacaaacttaagcgtaactggcgtaaacccagaggtattgacaacag 120
Query: 629 agtgcgcaggcgttttaagggccagtacttgatgcccagcattggttacggatcaaacaa 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agtgcgcaggcgttttaagggccagtacttgatgcccagcattggttacggatcaaacaa 180
Query: 689 gaagacccgtcacatgctacctaatggattccgtaaggtg 728
||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaagacccgtcacatgctacctaatggattccgtaaggtg 220
>BF14_736_C1
Length = 796
Score = 83.8 bits (42), Expect = 7e-16
Identities = 66/73 (90%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 958 cagaagatcggcgtgaagtagcctttactggctgcgtttggtccgatgagtgagaga--c 1015
||||||||||||||||||||| ||||| ||||||||||| |||| |||||||||||| |
Sbjct: 661 cagaagatcggcgtgaagtagtctttagtggctgcgtttcgtccaatgagtgagagagcc 720
Query: 1016 ggctgccctttcc 1028
|| ||||||||||
Sbjct: 721 ggttgccctttcc 733
>BF01026A1A12
Length = 759
Score = 81.8 bits (41), Expect = 3e-15
Identities = 72/81 (88%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 958 cagaagatcggcgtgaagtagcctttactggctgcgtttggtccgatgagtgagagacgg 1017
||||||||||||||||||||||||||| |||||| ||| ||| |||||||||||| |||
Sbjct: 436 cagaagatcggcgtgaagtagcctttaatggctgtttttcgtctgatgagtgagagccgg 495
Query: 1018 ctgccctt-tccttttcccac 1037
||||||| |||||||||||
Sbjct: 496 ttgcccttacccttttcccac 516
>BF01059B2F03
Length = 703
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 958 cagaagatcggcgtgaagtagcctttactggctgcgtttggtccgatgagtg 1009
||||||||||||||||||||||||||| |||||| |||| ||||||||||||
Sbjct: 52 cagaagatcggcgtgaagtagcctttaatggctgagtttcgtccgatgagtg 1
>BF01031B1D09
Length = 754
Score = 79.8 bits (40), Expect = 1e-14
Identities = 77/87 (88%), Gaps = 3/87 (3%)
Strand = Plus / Plus
Query: 958 cagaagatcggcgtgaagtagcctttactggctgcgtttggtccgatgagtgagaga--c 1015
|||| ||||||||||||||||||||| ||||||||||| |||||| |||||||||| |
Sbjct: 547 cagacgatcggcgtgaagtagccttttatggctgcgtttcgtccgacgagtgagagagcc 606
Query: 1016 ggctgcccttt-ccttttcccaccctt 1041
||| ||||||| ||||||||| |||||
Sbjct: 607 ggcggccctttcccttttccctccctt 633
>BF01054B2B08
Length = 807
Score = 71.9 bits (36), Expect = 3e-12
Identities = 76/87 (87%), Gaps = 3/87 (3%)
Strand = Plus / Plus
Query: 958 cagaagatcggcgtgaagtagcctttactggctgcgtttggtccgatgagtgagaga--c 1015
|||||||||||||| ||| || ||||| ||||||||||| || |||||||||||||| |
Sbjct: 655 cagaagatcggcgtaaagcagtctttaatggctgcgtttcgttcgatgagtgagagagcc 714
Query: 1016 ggctgcccttt-ccttttcccaccctt 1041
|| |||||||| ||| |||||||||||
Sbjct: 715 ggttgccctttccctgttcccaccctt 741
>BF14_2467_C1
Length = 1121
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 958 cagaagatcggcgtgaagtagcctttactggctgcgtttggtccgatgagtgagag 1013
||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||||
Sbjct: 275 cagaagatcggcgtgaagtagtctttaatggctgtttttcgtccgatgagtgagag 330
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 221,178
Number of extensions: 18693
Number of successful extensions: 18693
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 18693
Number of HSP's successfully gapped: 8
Length of query: 1405
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1388
Effective length of database: 8,119,229
Effective search space: 11269489852
Effective search space used: 11269489852
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)