BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21103 (UTR included)
(1603 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022A1G11 1388 0.0
>BF01022A1G11
Length = 724
Score = 1388 bits (700), Expect = 0.0
Identities = 717/724 (99%)
Strand = Plus / Plus
Query: 307 ttgtcatattttataaatacagacaaaaagaaaaggaaatttcaatcaataaataatcac 366
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 ttgtcatattttataaatacagacaaaaagaaaaggnnntttcaatcaataaataatcac 60
Query: 367 gtttgcttaatatggacgagtcaaagaaaaatacacaaaacttcagtgttgaggattata 426
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 61 gtttgcttaatatggacgagtcaaagaaaaacacacaaaacttcagtgttgaggattata 120
Query: 427 aaaataagggcaatgaatgtgttaaggatggaaaatatattgaagctgtattacattaca 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaaataagggcaatgaatgtgttaaggatggaaaatatattgaagctgtattacattaca 180
Query: 487 cccatgcaattaaaatggaccctcaaaattatgttttatacagcaacaggtcttttgcat 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cccatgcaattaaaatggaccctcaaaattatgttttatacagcaacaggtcttttgcat 240
Query: 547 ttctgaaattaggtcaacattatttatctttacaggatgcaaatgaaacagtcaggcttc 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttctgaaattaggtcaacattatttatctttacaggatgcaaatgaaacagtcaggcttc 300
Query: 607 agcctcaatgggcaaagggatactttcgccgtggagaagttgaagctgctagtgaactat 666
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 301 agcctcaatgggcaaagggatactttcgccgtggagaggttgaagctgctagtgaactat 360
Query: 667 atgatgaggcaataatatcatacaccagggctctacgacttgaaccacataatacaaaat 726
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atgacgaggcaataatatcatacaccagggctctacgacttgaaccacataatacaaaat 420
Query: 727 tgatggaatcgataaaaaatattactaaaattcaacaaaataaaattaaaaattcacaca 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgatggaatcgataaaaaatattactaaaattcaacaaaataaaattaaaaattcacaca 480
Query: 787 atgttatatggttgagcacttgtgtgggtttcattattggtataattgtcgttatattgg 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atgttatatggttgagcacttgtgtgggtttcattattggtataattgtcgttatattgg 540
Query: 847 attataccctgactgaaaaaccaacattatcacatccatttagcatggtggcattttcga 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 attataccctgactgaaaaaccaacattatcacatccatttagcatggtggcattttcga 600
Query: 907 tggctttagcaggtgtgggttgggttctagggaagactgcaaccatgatgtctgctctag 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tggctttagcaggtgtgggttgggttctagggaagactgcaaccatgatgtctgctctag 660
Query: 967 gagcagggaaatcaatacagccaccaccagatctagcttctcattgttgtgaggaacatg 1026
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 661 gagcagggaaatcaatacagccaccaccngatctagcttctcattgttgtgaggaacatg 720
Query: 1027 aaca 1030
||||
Sbjct: 721 aaca 724
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 290,811
Number of extensions: 7560
Number of successful extensions: 7560
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7560
Number of HSP's successfully gapped: 1
Length of query: 1603
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1586
Effective length of database: 8,119,229
Effective search space: 12877097194
Effective search space used: 12877097194
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)