BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21104 (UTR included)
(2545 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01013A1D12 1485 0.0
>BF01013A1D12
Length = 813
Score = 1485 bits (749), Expect = 0.0
Identities = 770/777 (99%)
Strand = Plus / Plus
Query: 981 ctacagttcttagaatccataaatgtgcagccgcctttagtaaaaaaagtttttgttgca 1040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37 ctacagttcttagaatccataaatgtgcagccgcctttagtaaaaaaagtttttgttgca 96
Query: 1041 aatctggactataaagcagatagagctaaaattaaggaagtatttaaaatggctggtaaa 1100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 aatctggactataaagcagatagagctaaaattaaggaagtatttaaaatggctggtaaa 156
Query: 1101 gttagaaacattgatttagctattgataaggatggaaacagtagaggctttgctgttatt 1160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 gttagaaacattgatttagctattgataaggatggaaacagtagaggctttgctgttatt 216
Query: 1161 gaatatgatcatcctgtagaagctgtacaggcaatatcaatgtttgacaaacaaatgtta 1220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 gaatatgatcatcctgtagaagctgtacaggcaatatcaatgtttgacaaacaaatgtta 276
Query: 1221 tatgagcgtagaatgacagtaagaatggataggggagtgacagataaatcagagctgaga 1280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tatgagcgtagaatgacagtaagaatggataggggagtgacagataaatcagagctgaga 336
Query: 1281 ttgccagaaggtttgaaaagcattggtataggattgggaccaaatggggaacccctcaga 1340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ttgccagaaggtttgaaaagcattggtataggattgggaccaaatggggaacccctcaga 396
Query: 1341 gatgtagcaagaaacctacctcagaatacatccacaaataacttgagtcttggaagtaca 1400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 gatgtagcaagaaacctacctcagaatacatccacaaataacttgagtcttggaagtaca 456
Query: 1401 ggatctgcaataggtgctggagttttaggtgcagttcccactgctggggtggggttgaat 1460
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 457 ggctctgcaataggtgctggagttttaggtgcagttcccactgctggggtgggattgaat 516
Query: 1461 ggtcttggagcaagcctgtcagcaaatactttgggaaccaatgcagctcttagcaacagt 1520
||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||
Sbjct: 517 ggtcttggagcaagcctgtcagcaaatactttgggaaccaacgctgctcttagtaacagt 576
Query: 1521 ctaggcttacaggccttaggactgactggtcttggtgccttacaaaatcaacttcttcaa 1580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 ctaggcttacaggccttaggactgactggtcttggtgccttacaaaatcaacttcttcaa 636
Query: 1581 caaggtctgactgcaaatgatctagccacagtactcacacaggcccaggctgctaatgtt 1640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 caaggtctgactgcaaatgatctagccacagtactcacacaggcccaggctgctaatgtt 696
Query: 1641 aactctaacaacctatctctgggtaccccggatatgggtagtggtgtactcggaaattca 1700
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 697 aactccaacaacctatctctgggtaccccggatatgggtagtggtgtacttggaaattca 756
Query: 1701 ggcttgggcaataacgttctgggcgcaaattcctctttaagtagtgggtcactttca 1757
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 ggcttgggcaataacgttctgggcgcaaattcctctttaagtagtgggtcactttca 813
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 303,232
Number of extensions: 5962
Number of successful extensions: 5962
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5962
Number of HSP's successfully gapped: 1
Length of query: 2545
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2528
Effective length of database: 8,119,229
Effective search space: 20525410912
Effective search space used: 20525410912
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)