BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21105 (UTR included)
(4000 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01015A2E08 1213 0.0
>BF01015A2E08
Length = 635
Score = 1213 bits (612), Expect = 0.0
Identities = 629/635 (99%)
Strand = Plus / Plus
Query: 1825 atttacagccattatttgattctccaaaattagacagagaactgcgcacaacagtaagag 1884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atttacagccattatttgattctccaaaattagacagagaactgcgcacaacagtaagag 60
Query: 1885 aaacatttaaagagttctgtagcaatggaaatggggagggcgtatcagggattcgtgacg 1944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaacatttaaagagttctgtagcaatggaaatggggagggcgtatcagggattcgtgacg 120
Query: 1945 aagggaatgatgatataccaagaggaggtccagatgagccagctttttctgacgatgaag 2004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagggaatgatgatataccaagaggaggtccagatgagccagctttttctgacgatgaag 180
Query: 2005 atgatatgcttccaactatagctgaagacactgatgacgatgatttgccattatcagaag 2064
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 181 atgatatgcttccaactatagctgaagacactgatgacgatgatttgccattatcagagg 240
Query: 2065 ttcgcgccagggaacggcccgagttggccgccgctatgccactattacttcgaccttttg 2124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttcgcgccagggaacggcccgagttggccgccgctatgccactattacttcgaccttttg 300
Query: 2125 ctgaaacattactagacgaacggtcgtccacagccgctactgcgttattaaacgcctgca 2184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctgaaacattactagacgaacggtcgtccacagccgctactgcgttattaaacgcctgca 360
Query: 2185 gcagccctatgccaacagcgactgcgttagctgatttattcgctgctaccttgcaagaag 2244
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 361 gcagccctatgcccacagcgactgcattagctgatttattcgctgctaccttgcaagaag 420
Query: 2245 caccacctttacacatcaatcgcaatcctacaccagctgaattagacactgtaatgaact 2304
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 421 caccacctttacacatcaatcgcaatcctacaccagctgaattagacaccgtaatgaact 480
Query: 2305 ctccaatattttccatgttcaactatctcgttggcagcaatgatagcaatgaagcgaaac 2364
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 481 ctccaatattttccatgttcaactatcttgttggcagcaatgatagcaatgaagcgaaac 540
Query: 2365 gtaaactagtattagaaacattcaaagaaatatatgcacagagttcggtacatagtgtag 2424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtaaactagtattagaaacattcaaagaaatatatgcacagagttcggtacatagtgtag 600
Query: 2425 gttactgtttactattttatcttaaagtatgttat 2459
|||||||| ||||||||||||||||||||||||||
Sbjct: 601 gttactgtntactattttatcttaaagtatgttat 635
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 562,690
Number of extensions: 20817
Number of successful extensions: 20817
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 20817
Number of HSP's successfully gapped: 1
Length of query: 4000
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3982
Effective length of database: 8,109,745
Effective search space: 32293004590
Effective search space used: 32293004590
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)