BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21113 (UTR included)
(5056 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01029B1A03 1530 0.0
BF01045B2E10 739 0.0
>BF01029B1A03
Length = 772
Score = 1530 bits (772), Expect = 0.0
Identities = 772/772 (100%)
Strand = Plus / Plus
Query: 1814 cacagttccgagtgacattgaaactgaagacagtgggatccatacagctagagactcgtg 1873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cacagttccgagtgacattgaaactgaagacagtgggatccatacagctagagactcgtg 60
Query: 1874 tgcaccagctgacgatattgcagatttgactcaagtagcttctccaattggagaacctat 1933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcaccagctgacgatattgcagatttgactcaagtagcttctccaattggagaacctat 120
Query: 1934 ggctgaagtatctgaatacgagtcgtccaacgagtacaacgataccataatgactttaga 1993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggctgaagtatctgaatacgagtcgtccaacgagtacaacgataccataatgactttaga 180
Query: 1994 acccgctaaaactgagaaacctattgggatggattcggagccgtatcagatgaacgatga 2053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acccgctaaaactgagaaacctattgggatggattcggagccgtatcagatgaacgatga 240
Query: 2054 agttcaaggaaacgaggaggaagatagtgatagtggaagcaattatctccaagccgtttc 2113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agttcaaggaaacgaggaggaagatagtgatagtggaagcaattatctccaagccgtttc 300
Query: 2114 tcaaccggaagaaagcagcgccacggaaattacagagatacaaatagataaagaagatga 2173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcaaccggaagaaagcagcgccacggaaattacagagatacaaatagataaagaagatga 360
Query: 2174 agacactttaaagagtctggacaatcaggactccagtgtaagtcttaatgaacccgcgtc 2233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agacactttaaagagtctggacaatcaggactccagtgtaagtcttaatgaacccgcgtc 420
Query: 2234 cacggcttccgagggcgacacggtcgtgttccagggaaagatgaccattcacgtgaactt 2293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cacggcttccgagggcgacacggtcgtgttccagggaaagatgaccattcacgtgaactt 480
Query: 2294 gaatgacatccgcagttcttctggggctggatactgtaacactaacaatgtagctaacga 2353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gaatgacatccgcagttcttctggggctggatactgtaacactaacaatgtagctaacga 540
Query: 2354 gtcgactaacaacaagggcatggtaactgtctctaatattacaaccaccactaacatctc 2413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtcgactaacaacaagggcatggtaactgtctctaatattacaaccaccactaacatctc 600
Query: 2414 atcgaagtattccagaccatttcaaactaacattaaagcatctagcgacacgcttaacag 2473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atcgaagtattccagaccatttcaaactaacattaaagcatctagcgacacgcttaacag 660
Query: 2474 tgacgtttacattgacgattcatcgatgcactctcgtaatattaacgaaggtgttccgta 2533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tgacgtttacattgacgattcatcgatgcactctcgtaatattaacgaaggtgttccgta 720
Query: 2534 caccgacacgtcccataccgatcatggttttcataattgtgtacagaccccg 2585
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 caccgacacgtcccataccgatcatggttttcataattgtgtacagaccccg 772
>BF01045B2E10
Length = 717
Score = 739 bits (373), Expect = 0.0
Identities = 432/449 (96%), Gaps = 12/449 (2%)
Strand = Plus / Plus
Query: 4614 catctctacgagtcgctccgtcgctcttattgttagactttgtgattgtgatgtatgaaa 4673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 catctctacgagtcgctccgtcgctcttattgttagactttgtgattgtgatgtatgaaa 60
Query: 4674 attaattatataagtgatacattcatctcatatgcatcatccggccgactcctt---acc 4730
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 61 attaattatataagtgatacattcatctcatatgcatcatccggccgactccttcttacc 120
Query: 4731 ccagcactcgaaattagagcggcgatgacgtcatccggtgacttcatttccgccgtctca 4790
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 121 ccagcactcgaaattagagcggcgatgacgtcatccggtgacgtcatttccgccgtctca 180
Query: 4791 caagacgtctctggactcagccggactgagtccattactgcacgcttttgttttcctctc 4850
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 181 caagacgtctctggactcagccggactgagtccattactgcacgcttttattttcctctc 240
Query: 4851 tctctctccttgtttcgctccgtgtgagacacgaacgacttgcggaagtcta---agtgt 4907
|||| |||||||||||| |||||| ||||||||||||||||| ||||| |||||
Sbjct: 241 tctc----cttgtttcgctctgtgtga--cacgaacgacttgcggaggtctataaagtgt 294
Query: 4908 ttttagtgaattcttcaaagttggtggaccgtcgttcgtgtcattgtacagttattacca 4967
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 295 ttttagtgaattcttcaaagttcgtggaccgtcgttcgtgtcattgtacagttattacca 354
Query: 4968 tcgctttaggtacatctaagtctcacattatatgtacttaaatcaacaactcgaatatcc 5027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tcgctttaggtacatctaagtctcacattatatgtacttaaatcaacaactcgaatatcc 414
Query: 5028 tgaccgttattcccctaacatatgataat 5056
|||||||||||||||||||||||||||||
Sbjct: 415 tgaccgttattcccctaacatatgataat 443
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 430,621
Number of extensions: 7481
Number of successful extensions: 7481
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7477
Number of HSP's successfully gapped: 2
Length of query: 5056
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5038
Effective length of database: 8,109,745
Effective search space: 40856895310
Effective search space used: 40856895310
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)