BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21114 (UTR included)
(3736 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1246_C1 1546 0.0
>BF14_1246_C1
Length = 800
Score = 1546 bits (780), Expect = 0.0
Identities = 795/800 (99%)
Strand = Plus / Plus
Query: 2235 tatttgatgcaatcagaaaatataatagaatggtttgtcattgtgagtgtgtttttgata 2294
||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 tatttgatgcaatcagagaatataatagaatggcttgtcattgtgagtgtgtttttgata 60
Query: 2295 tcctatatttatacaaacattacatacacttggcaaaaccatgtcggagcgttcgcagtg 2354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcctatatttatacaaacattacatacacttggcaaaaccatgtcggagcgttcgcagtg 120
Query: 2355 ctggcaggatggacgaatctgatgatgatgatcggccagttgccagtgtttggtacctac 2414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctggcaggatggacgaatctgatgatgatgatcggccagttgccagtgtttggtacctac 180
Query: 2415 gtcgctatgtatcagaaggtccaaaaagaatttgcaaaactgttaatggcttattcttgc 2474
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 181 gtcgctatgtatcagaaggtccaaaaagaatttgcaaaactattaatggcttattcttgc 240
Query: 2475 atattaatcggatttactataagtttttgcgtgatatttcccgactcctcgtcttttgct 2534
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 241 atattaatcggatttactataagtttttgcgtgatatttcccgactcctcgtctttcgct 300
Query: 2535 aatccattcatgggcttcataactgttctgacaatgatgatcggcgaactcaacctagat 2594
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aatcctttcatgggcttcataactgttctgacaatgatgatcggcgaactcaacctagat 360
Query: 2595 ctccttttaaatgaaccggatggcaacgatccgccagtgctattggagttttcagctcag 2654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctccttttaaatgaaccggatggcaacgatccgccagtgctattggagttttcagctcag 420
Query: 2655 ataacttacgttctatttctaatgtttgtgacggtagtgcttatgaatttactggtcggt 2714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ataacttacgttctatttctaatgtttgtgacggtagtgcttatgaatttactggtcggt 480
Query: 2715 atcgcagttcatgacattcagggattgagaaaaacagctggtttgtcgaaattagtaaga 2774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atcgcagttcatgacattcagggattgagaaaaacagctggtttgtcgaaattagtaaga 540
Query: 2775 caaactaaacttatatcttacatggagctagcattattcaatggctatttacctaagtgt 2834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 caaactaaacttatatcttacatggagctagcattattcaatggctatttacctaagtgt 600
Query: 2835 cttttaaaaatactgcactcttcagcacttgtctctccgcaagcatatagagttgtattg 2894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cttttaaaaatactgcactcttcagcacttgtctctccgcaagcatatagagttgtattg 660
Query: 2895 agcgttaaaccattaaatccgagtgagaagcgtctcccaagggatattatgatggcggcg 2954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 agcgttaaaccattaaatccgagtgagaagcgtctcccaagggatattatgatggcggcg 720
Query: 2955 tatgatattgctaaaatgagaaaacaatatggacatacgatttcatcaaatggatcgacg 3014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tatgatattgctaaaatgagaaaacaatatggacatacgatttcatcaaatggatcgacg 780
Query: 3015 acgggagcatattcatgttt 3034
||||||||||||||||||||
Sbjct: 781 acgggagcatattcatgttt 800
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 414,919
Number of extensions: 8381
Number of successful extensions: 8381
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8379
Number of HSP's successfully gapped: 1
Length of query: 3736
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3718
Effective length of database: 8,109,745
Effective search space: 30152031910
Effective search space used: 30152031910
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)