BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21125 (UTR included)
(2830 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01040A1G09 72 5e-12
BF01033A1F05 72 5e-12
BF14_1626_C1 72 5e-12
BF01047A1H12 70 2e-11
BF01020B1C01 70 2e-11
BF01039A1G11 68 8e-11
BF01033A1E02 68 8e-11
>BF01040A1G09
Length = 753
Score = 71.9 bits (36), Expect = 5e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 2338 tatatatatatatatatgtgtatatatatatgtatatatgtatatata 2385
||||||||||||||||| ||||||||||||| ||||||| ||||||||
Sbjct: 578 tatatatatatatatatatgtatatatatatatatatatatatatata 625
Score = 71.9 bits (36), Expect = 5e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 2338 tatatatatatatatatgtgtatatatatatgtatatatgtatatata 2385
||||||||||||||||||| ||||||||||| ||||||| ||||||||
Sbjct: 580 tatatatatatatatatgtatatatatatatatatatatatatatata 627
>BF01033A1F05
Length = 770
Score = 71.9 bits (36), Expect = 5e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 2338 tatatatatatatatatgtgtatatatatatgtatatatgtatatata 2385
||||||||||||||||| ||||||||||||| ||||||| ||||||||
Sbjct: 487 tatatatatatatatatatgtatatatatatatatatatatatatata 534
Score = 71.9 bits (36), Expect = 5e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 2338 tatatatatatatatatgtgtatatatatatgtatatatgtatatata 2385
||||||||||||||||||| ||||||||||| ||||||| ||||||||
Sbjct: 489 tatatatatatatatatgtatatatatatatatatatatatatatata 536
>BF14_1626_C1
Length = 705
Score = 71.9 bits (36), Expect = 5e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 2338 tatatatatatatatatgtgtatatatatatgtatatatgtatatata 2385
||||||||||||||||| ||||||||||||| ||||||| ||||||||
Sbjct: 687 tatatatatatatatatatgtatatatatatatatatatatatatata 640
Score = 71.9 bits (36), Expect = 5e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 2338 tatatatatatatatatgtgtatatatatatgtatatatgtatatata 2385
||||||||||||||||| | ||||||||||||||||||| ||||||||
Sbjct: 699 tatatatatatatatatatatatatatatatgtatatatatatatata 652
Score = 69.9 bits (35), Expect = 2e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 2338 tatatatatatatatatgtgtatatatatatgtatatatgtatatat 2384
||||||||||||||||||| ||||||||||| ||||||| |||||||
Sbjct: 685 tatatatatatatatatgtatatatatatatatatatatatatatat 639
>BF01047A1H12
Length = 723
Score = 69.9 bits (35), Expect = 2e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 2338 tatatatatatatatatgtgtatatatatatgtatatatgtatatat 2384
||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 95 tatatatatatatatatatagatatatatatgtatatatgtatatat 49
>BF01020B1C01
Length = 602
Score = 69.9 bits (35), Expect = 2e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 2338 tatatatatatatatatgtgtatatatatatgtatatat 2376
||||||||||||||||| |||||||||||||||||||||
Sbjct: 562 tatatatatatatatatatgtatatatatatgtatatat 600
>BF01039A1G11
Length = 744
Score = 67.9 bits (34), Expect = 8e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 2339 atatatatatatatatgtgtatatatatatgtatatatgtatatat 2384
|||| |||||| |||||||||||||||||||||||||| |||||||
Sbjct: 87 atatgtatatacatatgtgtatatatatatgtatatatatatatat 132
>BF01033A1E02
Length = 815
Score = 67.9 bits (34), Expect = 8e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 2333 aaaagtatatatatatatatatgtgtatatatatatgtatatatgtatatataa 2386
|||| ||||||||||||||||| | ||||||||||| ||||||| |||||||||
Sbjct: 168 aaaattatatatatatatatatatatatatatatatatatatatatatatataa 115
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 324,390
Number of extensions: 14381
Number of successful extensions: 14381
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 14320
Number of HSP's successfully gapped: 11
Length of query: 2830
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2813
Effective length of database: 8,119,229
Effective search space: 22839391177
Effective search space used: 22839391177
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)