BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21128 (UTR included)
(2299 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01034B1E09 1291 0.0
>BF01034B1E09
Length = 707
Score = 1291 bits (651), Expect = 0.0
Identities = 693/707 (98%)
Strand = Plus / Plus
Query: 924 atggatgttatggaattgttggagaagagagtgaagtctcgtttctcccatcgtcacata 983
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 atggatgttatggaattattggagaagagagtgaagtcccgtttctcccatcgtcacata 60
Query: 984 ttcatgttccccaacgaatgctcggatcctttgacgtcgtgtaagaggctgttcgttgat 1043
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 61 ttcatgttccccaacgagtgctcggatcccttgacgtcgtgtaagaggctgttcgttgat 120
Query: 1044 accatgagcttgccaaccagcctgggtaaacggagaaaagataaaagaaaaagaaagaaa 1103
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 121 accatgagcttgccaaccagcctgggtaaacggagaaaagataaaaggaaaagaaagaaa 180
Query: 1104 tctgaatctatacagggggacgtacaaacagacggatatgcagtgccgatagaggtagtc 1163
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 181 tctgaatctatacagggggacgtacaaacagacggatatgctgtgccgatagaagtagtc 240
Query: 1164 aagaggtgcagcatggaattgacggactttgaaatagattcaacattcatagaggagtgg 1223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagaggtgcagcatggaattgacggactttgaaatagattcaacattcatagaggagtgg 300
Query: 1224 aacacacacatacaggagctggctgagaacgataagtttagtgatgttttggagaaattt 1283
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 301 aacacacacatacaggagctggccgagaacgataagtttagtgatgttttggagaaattt 360
Query: 1284 agctattatacggtcaacgaacagatatacaggaatgttttgtatcagataatatcaaaa 1343
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agctattatatggtcaacgaacagatatacaggaatgttttgtatcagataatatcaaaa 420
Query: 1344 ctatcaccggcgaaaccttatatcgatgtgagtgatgtgtcatcgtgtgtagatggaatg 1403
|||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 421 ctatcaccggcgaagccttatatcgatgtgagtgatgtgtcatcgtgtgtggatggaacg 480
Query: 1404 gtgtctccggagcactcggtgaagctgctgcaatccctgtccatactggagctgtccctg 1463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtgtctccggagcactcggtgaagctgctgcaatccctgtccatactggagctgtccctg 540
Query: 1464 gtgatagccatgatgcatgctatggagatatttgatgggcaacccatgaattttgagatg 1523
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 541 gtgatagccatgatgcatgctatggagatatttgatggccaacccatgaattttgagatg 600
Query: 1524 gttttacacagatacagcaagttcgccaacactcactcatcagcgcaggcggtgccgcgg 1583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gttttacacagatacagcaagttcgccaacactcactcatcagcgcaggcggtgccgcgg 660
Query: 1584 ccggtgatactcaaagctttcgaacacctgcaccagctggagataat 1630
|||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ccggtgattctcaaagctttcgaacacctgcaccagctggagataat 707
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 269,175
Number of extensions: 5683
Number of successful extensions: 5683
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5683
Number of HSP's successfully gapped: 1
Length of query: 2299
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2282
Effective length of database: 8,119,229
Effective search space: 18528080578
Effective search space used: 18528080578
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)