BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21130 (UTR included)
(2386 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_868_C2 1162 0.0
BF01024B1F06 1084 0.0
BF14_868_C1 775 0.0
>BF14_868_C2
Length = 865
Score = 1162 bits (586), Expect = 0.0
Identities = 623/632 (98%), Gaps = 5/632 (0%)
Strand = Plus / Plus
Query: 1637 gacgtcgtcttcgcacgagtactttatagcctacacgttggacgagctggaggccggcaa 1696
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gacgtcctcttcgcacgagtactttatagcctacacgttggacgagctggaggccggcaa 60
Query: 1697 gtacgaggcggtggtgagggccgagaacgaccacagctggagcgagcactccgactccac 1756
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 61 gtacgaggcggtggtgagggccgagaacgatcacagctggagcgagcactccgactccac 120
Query: 1757 cctgcttgatatagaggcgaagccggagtacattcagcatgcttcagtgtacagaggcaa 1816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cctgcttgatatagaggcgaagccggagtacattcagcatgcttcagtgtacagaggcaa 180
Query: 1817 ttcagcgcattccgtgaaatccgtggccctcacgactaccctcatgtatcttctggtacg 1876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttcagcgcattccgtgaaatccgtggccctcacgactaccctcatgtatcttctggtacg 240
Query: 1877 gacgctgtaaaccgacgtttagactaattatttattattaataacgatataagacgttta 1936
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aacgctgtaaaccgacgtttagactaattatttattattaataacgatataagacgttta 300
Query: 1937 atttaatacagcttctaggtgcgactaaaatattaatactagatttttttttttttaatt 1996
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 301 atttaatacagcttctaggtgcgactaaaatattaatactaga--tttttttttttaatt 358
Query: 1997 tttcgatc--aagttttcggttcgcatttcttagaagtgccaatgaaaaaaaaataatgc 2054
|||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 359 tttcgatcaaaagttttcggttcgcatttcttagaagtgccaatg-aaaaaaattaatgc 417
Query: 2055 ccagttacttaattacgcgaaaatcaaaacaaaattaacaataactgagccacgttacgt 2114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ccagttacttaattacgcgaaaatcaaaacaaaattaacaataactgagccacgttacgt 477
Query: 2115 ttatctttaatttactgtaaatattatgttttaatgaaagtaaatagccgacagcgacat 2174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 ttatctttaatttactgtaaatattatgttttaatgaaagtaaatagccgacagcgacat 537
Query: 2175 tcatgtaagtgtatgattattatttaaatgtatgaaacgaccgcgactagacatctggtc 2234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 tcatgtaagtgtatgattattatttaaatgtatgaaacgaccgcgactagacatctggtc 597
Query: 2235 gttacgttacgttacgttacgttacgttacgt 2266
||||||||||||||||||||||||||||||||
Sbjct: 598 gttacgttacgttacgttacgttacgttacgt 629
Score = 226 bits (114), Expect = 1e-58
Identities = 123/125 (98%), Gaps = 2/125 (1%)
Strand = Plus / Plus
Query: 2264 cgttacgttacgttacgttacgttacgttacgtgcattctatgaaggattactcacgagt 2323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 cgttacgttacgttacgttacgttacgttacgtgcattctatgaaggattactcacgagt 656
Query: 2324 aattttagtttatag--aaaaaaaaatatataggtaattattaccaaagtgtaattaagt 2381
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 aattttagtttatagaaaaaaaaaaatatataggtaattattaccaaagtgtaattaagt 716
Query: 2382 gttaa 2386
|||||
Sbjct: 717 gttaa 721
>BF01024B1F06
Length = 751
Score = 1084 bits (547), Expect = 0.0
Identities = 562/567 (99%)
Strand = Plus / Plus
Query: 484 cagaagcgagacactctatgaagagacgtgaaacagatgatgtgaactatgacgatgttt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 cagaagcgagacactctatgaagagacgtgaaacagatgatgtgaactatgacgatgttt 244
Query: 544 tagctgatgaggccactgataatgaagaacaaaatgatgctgaaggcaacgatgtcgacg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tagctgatgaggccactgataatgaagaacaaaatgatgctgaaggcaacgatgtcgacg 304
Query: 604 aagacgagccggtcgacgccataatagagacgcctcccaaaaattacagcgcaataatcg 663
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 aagacgagccggtcgacgctataatagagacgcctcccaaaaattacagcgcaataatcg 364
Query: 664 gacaggacgtcagactggagtgtaaagtatctccttcgtttggtgtcgtggtccaatgga 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gacaggacgtcagactggagtgtaaagtatctccttcgtttggtgtcgtggtccaatgga 424
Query: 724 gcaaagacaataacaaatacttcctggggactctaaaggctgttgagcaagacctcaaca 783
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 425 gcaaagacaataacaaatacttcctgggaactctaaaggccgttgagcaagacctcaaca 484
Query: 784 cgtacggagtggactcagagaggtttgccatcgccgctaattccacggacctgttgatcc 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 cgtacggagtggactcagagaggtttgccatcgccgctaattccacggacctgttgatcc 544
Query: 844 gcggcgtccgaccggaagacgccggctcgttcgcctgcaccctgatgcagttcaaaccgg 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gcggcgtccgaccggaagacgccggctcgttcgcctgcaccctgatgcagttcaaaccgg 604
Query: 904 aagtcatcaaacaccagctctccgtactggaatacccgaagattgtcagtttcacggcga 963
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 605 aagtcatcaaacaccagctctctgtactggaatacccgaagattgtcagtttcacggcga 664
Query: 964 ccaacggcggctcagtgatggagggctcgtccgtgtccctgacgtgcgaggcggtcggct 1023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ccaacggcggctcagtgatggagggctcgtccgtgtccctgacgtgcgaggcggtcggct 724
Query: 1024 ccccgccgccgcaggtcgtgtggtcgc 1050
|||||||||| ||||||||||||||||
Sbjct: 725 ccccgccgccacaggtcgtgtggtcgc 751
>BF14_868_C1
Length = 1052
Score = 775 bits (391), Expect = 0.0
Identities = 468/490 (95%), Gaps = 19/490 (3%)
Strand = Plus / Plus
Query: 1904 ttatttattattaataacgatataagacgtttaatttaatacagcttctaggtgcgacta 1963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttatttattattaataacgatataagacgtttaatttaatacagcttctaggtgcgacta 60
Query: 1964 aaatattaatactaga----tttttttttttttaatttttcgatcaa--gttttcggttc 2017
|||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 61 aaatattaatgctagaatcttttttttttttttaatttttcgatcaaaagttttcggttc 120
Query: 2018 gcatttcttagaagtgccaatgaaaaaaaaataatgcccagttacttaattacgcgaaaa 2077
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 121 gcatttcttagaagtgccaatgaaaaaaa--taatgcccagttacttaattacgcgaaaa 178
Query: 2078 tcaaaacaaaattaacaataactgagccacgttacgtttatctttaatttactgtaaata 2137
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 179 tcaaaacaaaattaacaataactgagccacgttgcgtttatctttaatttactgtaaata 238
Query: 2138 ttatgttttaatgaaagtaaatagccgacagcgacattcatgtaagtgtatgattattat 2197
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 ttatgttttaatggaagtaaatagccgacagcgacattcatgtaagtgtatgattattat 298
Query: 2198 ttaaatgtatgaaacgaccgcgactagacatctggtcgttacgttacgttacgttacgtt 2257
|||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 299 ttaaatgtatgaaacgaccgcgactagacatctggtcgtt----------acgttacgtt 348
Query: 2258 acgttacgttacgttacgttacgttacgttacgttacgtgcattctatgaaggattactc 2317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 acgttacgttacgttacgttacgttacgttacgttacgtgcattctatgaaggattactc 408
Query: 2318 acgagtaattttagtttatag-aaaaaaaaatatataggtaattattaccaaagtgtaat 2376
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 409 acgagtaattttagtttatagaaaaaaaaaatatataggtaattattaccaaagtgtaat 468
Query: 2377 taagtgttaa 2386
||||||||||
Sbjct: 469 taagtgttaa 478
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 349,961
Number of extensions: 27638
Number of successful extensions: 27638
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 27603
Number of HSP's successfully gapped: 4
Length of query: 2386
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2369
Effective length of database: 8,119,229
Effective search space: 19234453501
Effective search space used: 19234453501
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)