BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21133 (UTR included)
(1873 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3073_C1 2319 0.0
>BF14_3073_C1
Length = 1248
Score = 2319 bits (1170), Expect = 0.0
Identities = 1204/1215 (99%), Gaps = 4/1215 (0%)
Strand = Plus / Plus
Query: 479 acttcatgataatcgtttagaaatggctgttaatggaaaagatttgtcagagcctatcgt 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33 acttcatgataatcgtttagaaatggctgttaatggaaaagatttgtcagagcctatcgt 92
Query: 539 gcctccttcgtcattaatacgccgagttagctcgcgttcaataagaaactctatatcgga 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 gcctccttcgtcattaatacgccgagttagctcgcgttcaataagaaactctatatcgga 152
Query: 599 ggacaaagaaaacggcgacgtgtccccgaagggttcattcataaacaaatacaagaaaac 658
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 153 ggacaaagaaaacggcgacgtgtccccaaagggttcattcataaacaaatacaagaaaac 212
Query: 659 cccggaagccttgaagaatttccacattaatgatgagagcgaattagaagtacccggcac 718
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 213 cccggaagccttgaagaatttccacattaatgatgagagcgaattggaagtacccggcac 272
Query: 719 gccgatgacgccgagaacctccacaacacctggtcatgagaagtgtacgttccaccacga 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gccgatgacgccgagaacctccacaacacctggtcatgagaagtgtacgttccaccacga 332
Query: 779 cctggagttagatcaccgaccacccaccagggaggcgcttctgccggacatggccagttc 838
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 333 cctggagttagatcaccgaccacccaccagggaggcgcttctaccggacatggccagttc 392
Query: 839 ctacaggcttctgcttaccggcttaggtgaggaccccaagagacaaggtctcctcaaaac 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ctacaggcttctgcttaccggcttaggtgaggaccccaagagacaaggtctcctcaaaac 452
Query: 899 accagaaagagcggctaaggccatgttattcttcacaaaaggctacgaccagagcttaga 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 accagaaagagcggctaaggccatgttattcttcacaaaaggctacgaccagagcttaga 512
Query: 959 agaggtgttaaataacgccatattcgatgaggacacagatgaaatggttgtcgtgaaaga 1018
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 agaggtgctaaataacgccatattcgatgaggacacagatgaaatggttgtcgtgaaaga 572
Query: 1019 catagaaatgttctcgatgtgcgagcaccacttagtgccgttctacgggaaggtctccat 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 catagaaatgttctcgatgtgcgagcaccacttagtgccgttctacgggaaggtctccat 632
Query: 1079 cgggtacctgccccagggcaagatcctcggtttgagcaagctggccaggatcgtagagat 1138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 cgggtacctgccccagggcaagatcctcggtttgagcaagctggccaggatcgtagagat 692
Query: 1139 ctactcccgccgtctccaggtgcaggagcgtctgacgaaacagatcgcgctggcggtgac 1198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 ctactcccgccgtctccaggtgcaggagcgtctgacgaaacagatcgcgctggcggtgac 752
Query: 1199 acaggcggtgagaccggcgggggtcgcggtcgtcgtggagggagttcacatgtgcatggt 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 acaggcggtgagaccggcgggggtcgcggtcgtcgtggagggagttcacatgtgcatggt 812
Query: 1259 gatgagaggagtgcagaagatcaacagcaagacggtgacgtccacgatgctgggcgtctt 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 gatgagaggagtgcagaagatcaacagcaagacggtgacgtccacgatgctgggcgtctt 872
Query: 1319 ccgcgacgacccgaagaccagggaggagttcctcaacctggtgcacttcaagtgagaacg 1378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 ccgcgacgacccgaagaccagggaggagttcctcaacctggtgcacttcaagtgagaacg 932
Query: 1379 cgtctcctatattgtaataacattggctgtttgttttgtatacttcacacgcctatttta 1438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933 cgtctcctatattgtaataacattggctgtttgttttgtatacttcacacgcctatttta 992
Query: 1439 ttccttgtctctcccttctattctctccttgtttccgtttgtcttaacttttttttctat 1498
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 993 ttccttgtctctcccttctattctctccctgtttccgtttgtcttaactttttttcctat 1052
Query: 1499 tgaagctct----cttattcttctgttgtgcaattcattcttcgagtggattgtctttat 1554
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1053 tgaagctctcttacttattcttctgttgtgcaattcattcttcgagtggattgtctttat 1112
Query: 1555 atttttatcgataacgtattttttatttagatttagccgacattccttgttatttcttat 1614
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1113 atttttatcgataacgtattttttatttagacttagccgacattccttgttatttcttat 1172
Query: 1615 ttaagttgtagctaaatgtattacactaagcaacaacacttccgacgtgttgagttatgc 1674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1173 ttaagttgtagctaaatgtattacactaagcaacaacacttccgacgtgttgagttatgc 1232
Query: 1675 caatattttgactat 1689
|||||||||||||||
Sbjct: 1233 caatattttgactat 1247
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 370,196
Number of extensions: 32270
Number of successful extensions: 32270
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 32269
Number of HSP's successfully gapped: 1
Length of query: 1873
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1856
Effective length of database: 8,119,229
Effective search space: 15069289024
Effective search space used: 15069289024
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)