BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21154 (UTR included)
(2131 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2089_C1 1588 0.0
>BF14_2089_C1
Length = 882
Score = 1588 bits (801), Expect = 0.0
Identities = 822/829 (99%)
Strand = Plus / Plus
Query: 551 acatctctccgatcacctgtcagagctggtcgagtcaaccctatcagatctggaacagtc 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 acatctctccgatcacctgtcagagctggtcgagtcaaccctatcagatctggaacagtc 113
Query: 611 gaagtgtatagccatcgaggatgatatggacctgcagcctctcaaccttggaatgatagc 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 gaagtgtatagccatcgaggatgatatggacctgcagcctctcaaccttggaatgatagc 173
Query: 671 ctcctactactacataaactacactactatagaactgttcagcttgtctctgacttcaaa 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 ctcctactactacataaactacactactatagaactgttcagcttgtctctgacttcaaa 233
Query: 731 gacgaagatccgaggtcttctggagatcatatcttcagcggcggagtactccgagctgag 790
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 234 gacgaagatccgaggtcttctagagatcatatcttcagcggcggagtactccgagctgag 293
Query: 791 cgtcaggcatagagaggagaacgtcatcaagacgctcgctgccaaggtgcctcacaaatc 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 cgtcaggcatagagaggagaacgtcatcaagacgctcgctgccaaggtgcctcacaaatc 353
Query: 851 gtcatcgccgacagtccgctacaactccccccacgtgaaggcgcacgtgttattacaagc 910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 gtcatcgccgacagtccgctacaactccccccacgtgaaggcgcacgtgttattacaagc 413
Query: 911 tcatctctcaaggatgcaacttccggcggaactgcaggctgataccgccattgtgctcac 970
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tcatctctccaggatgcaacttccggcggaactgcaggctgataccgccattgtgctcac 473
Query: 971 aaaggctatacgtttgatccaggcgtgtgtggacgtggtttccagcagtggctggctatc 1030
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 taaggctatacgtttgatccaggcgtgtgtggacgtggtttccagcagtggctggctatc 533
Query: 1031 cccagctgttgcggctatggaactagcgcaaatggtgacccaggctatgtgggcgaagga 1090
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 cccagctgttgcggctatggaactagcgcaaatggtgacccaggctatgtgggcgaagga 593
Query: 1091 ctcctacctcaaacagctgcctcacttcaccccggaactgctccaacggtgttccgaacg 1150
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 594 ctcctacctcaaacagctgcctcacttcaccccagaactgctccaacgttgttccgaacg 653
Query: 1151 cggggttgatacggtcttcgatgtcatggaactcgaggattcagctcgcacggagctgct 1210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 cggggttgatacggtcttcgatgtcatggaactcgaggattcagctcgcacggagctgct 713
Query: 1211 taggctcacgccgacggaaatggcggatgtggctagattctgtaacagatatccgaatgt 1270
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 caggctcacgccgacggaaatggcggatgtggctagattctgtaacagatatccgaatgt 773
Query: 1271 tgagctgagttatgaggtgttggatagtaggagagtgaggagtggtgggccggtagtgtt 1330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 774 tgagctgagttatgaggtgttggatagtaggagagtgaggagtggtgggccggtagtttt 833
Query: 1331 gaaggttacgttggagagggaagacgaggtgacggggccggtcgcagcg 1379
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 gaaggttacgttggagagggaagacgaggtgacggggccggtcgcagcg 882
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 267,528
Number of extensions: 6856
Number of successful extensions: 6856
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6856
Number of HSP's successfully gapped: 1
Length of query: 2131
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2114
Effective length of database: 8,119,229
Effective search space: 17164050106
Effective search space used: 17164050106
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)