BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21155 (UTR included)
(1255 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_648_C1 470 e-132
BF14_729_C2 68 4e-11
>BF14_648_C1
Length = 1109
Score = 470 bits (237), Expect = e-132
Identities = 240/241 (99%)
Strand = Plus / Plus
Query: 506 ccttcctctgccaagctgtaacgcgatctatggcaacttcgcccgtcaaggcaacgtggc 565
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ccttgctctgccaagctgtaacgcgatctatggcaacttcgcccgtcaaggcaacgtggc 343
Query: 566 catagaactacaggcgtacgccaacctccacctgcggaggtcttacgagttcttgctgtc 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 catagaactacaggcgtacgccaacctccacctgcggaggtcttacgagttcttgctgtc 403
Query: 626 atccgcctactacaacaactatcagacaaacaggcagggctttagcaaactcttcaggaa 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 atccgcctactacaacaactatcagacaaacaggcagggctttagcaaactcttcaggaa 463
Query: 686 gttatccgacgacgcctggagcaagaccgtggacctcatcaaacatatcaccttgagagg 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 gttatccgacgacgcctggagcaagaccgtggacctcatcaaacatatcaccttgagagg 523
Query: 746 t 746
|
Sbjct: 524 t 524
>BF14_729_C2
Length = 1289
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 448 atactcccgacgtttcggttactctacagcaaccgagatcacggatagacgaga 501
||||||||||||||||||||||| | ||||||||| |||||||| ||||||||
Sbjct: 581 atactcccgacgtttcggttacttttcagcaaccgtgatcacgggcagacgaga 528
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 267,868
Number of extensions: 14873
Number of successful extensions: 14873
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 14873
Number of HSP's successfully gapped: 3
Length of query: 1255
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1238
Effective length of database: 8,119,229
Effective search space: 10051605502
Effective search space used: 10051605502
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)