BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21158 (UTR included)
(3031 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2545_C1 511 e-144
>BF14_2545_C1
Length = 1247
Score = 511 bits (258), Expect = e-144
Identities = 267/270 (98%)
Strand = Plus / Plus
Query: 2762 tgtttggaagtggttgtgttaatcattctctttacttttaaatctaaactaatgtaaact 2821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 tgtttggaagtggttgtgttaatcattctctttacttttaaatctaaactaatgtaaact 66
Query: 2822 tgtcatttaaagctatgccttaacagtccacctgagattgctactttaactagcaattta 2881
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 tgtcatttaaagctaagccttaacagtccacctgagattgctactttaactagcaattta 126
Query: 2882 gaattttttcttaccctggtttttaaatattggttcccgtggtactgagatttaatgtca 2941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 gaattttttcttaccctggtttttaaatattggttcccgtggtactgagatttaatgtca 186
Query: 2942 caaacaatatatccctatattaatctcagtatgcagtacaatgataaatacaataaatat 3001
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 187 caaacaatatatccctatattaatctcagtatgcagtacaatggtaaatacaataaatat 246
Query: 3002 aagagtaacattgcttactataaaaatata 3031
||||||||||||||||||||||| ||||||
Sbjct: 247 aagagtaacattgcttactataataatata 276
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 290,532
Number of extensions: 5465
Number of successful extensions: 5465
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5465
Number of HSP's successfully gapped: 1
Length of query: 3031
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3013
Effective length of database: 8,109,745
Effective search space: 24434661685
Effective search space used: 24434661685
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)