BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21164 (UTR included)
(1840 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01015B1C10 1193 0.0
BF01012A2E05 1068 0.0
>BF01015B1C10
Length = 634
Score = 1193 bits (602), Expect = 0.0
Identities = 625/634 (98%)
Strand = Plus / Plus
Query: 412 tgacttctttagcgtttaaagttaaaagtaaaaatggtcagcagatattgaaagatttga 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgacttctttagcgtttaaagttaaaagtaaaaatggtcagcagatattgaaagatttga 60
Query: 472 cctctgaaagtactgtgggtgaattaaaaatgtttctttcgagtatatcagacgttagcg 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cctctgaaagtactgtgggtgaattaaaaatgtttctttcgagtatatcagacgttagcg 120
Query: 532 ccgaaagaatctgcgtattgtgtggatatccacctaaaccattagacattagtaacgata 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccgaaagaatctgcgtattgtgtggatatccacctaaaccattagacattagtaacgata 180
Query: 592 acaaaaaaattactgatattggtttaaaaacgggggagtcattaatagttgaagagaaat 651
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 181 acaaaaaaattactgatattggtttaaaaacgggagagtcattaatagttgaagagaaat 240
Query: 652 cagcgccagcaccagaaaataagaaaccagagatgactaagccagtggagaatggcgtgt 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cagcgccagcaccagaaaataagaaaccagagatgactaagccagtggagaatggcgtgt 300
Query: 712 cgcacgaaactataggaccctgcagacctgggattttaatgaaaaaagttgttccttctg 771
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cgcacgaaacaataggaccctgcagacctgggattttaatgaaaaaagttgttccttctg 360
Query: 772 ataactcttgtctctttactagtataggttttgtattaaatggtaatatagatacaacag 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ataactcttgtctctttactagtataggttttgtattaaatggtaatatagatacaacag 420
Query: 832 tccatacacttatgcgtcagattattgcaatggaagtagctagcgatcataacacatata 891
||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 421 tccatacacttatgcgtcagattattgcaatggaannnnctagcgatcataacacataca 480
Query: 892 acgagggtgtcttgggacgtccaaatgcagaatattgtgcttggattcagcaacccagct 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acgagggtgtcttgggacgtccaaatgcagaatattgtgcttggattcagcaacccagct 540
Query: 952 cttggggtggggccatcgaggtggcgattctgtcacgtttctatggtttagaaatggctg 1011
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cttggggtggggcgatcgaggtggcgattctgtcacgtttctatggtttagaaatggctg 600
Query: 1012 tagtagacacacttaatgctataataaatagatt 1045
| ||||||||||||||||||||||||||||||||
Sbjct: 601 tggtagacacacttaatgctataataaatagatt 634
>BF01012A2E05
Length = 586
Score = 1068 bits (539), Expect = 0.0
Identities = 557/562 (99%), Gaps = 2/562 (0%)
Strand = Plus / Plus
Query: 1054 ataagaattacggtcagagagtatttctcttatttgatggagtacactacgatccattat 1113
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataagaactatggtcagagagtatttctcttatttgatggagtacactacgatccattat 60
Query: 1114 acttagaacaatctgatggtgggattcaaacgatattcccctccgaggatatggatatat 1173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acttagaacaatctgatggtgggattcaaacgatattcccctccgaggatatggatatat 120
Query: 1174 atagggaagcggaacaattagctaaggaggcgaaatcgtcacgtcaattcacagatttaa 1233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atagggaagcggaacaattagctaaggaggcgaaatcgtcacgtcaattcacagatttaa 180
Query: 1234 acaaattcacattaaaatgtatgatctgtaataaactattgactggacaggtcgaagctc 1293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acaaattcacattaaaatgtatgatctgtaataaactattgactggacaggtcgaagctc 240
Query: 1294 agaaacatgctaaagaaactaaacatactaacttcggtgaagtgtaaaagttcaatttga 1353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agaaacatgctaaagaaactaaacatactaacttcggtgaagtgtaaaagttcaatttga 300
Query: 1354 taattaacatcagatttgagtcccatatttaatttg--tttttttttttcatataattgt 1411
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 301 taattaacatcagatttgagtcccatatttaatttgtttttttttttttcatataattgt 360
Query: 1412 catatcttgtatgcacacatttcttacatgagataattcctgaaaaaatgtaggacattt 1471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 catatcttgtatgcacacatttcttacatgagataattcctgaaaaaatgtaggacattt 420
Query: 1472 attaattttaatttttaatgttatggattgcttaatgtttgaatgtcacaaaataaaagt 1531
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 421 attaattttaatttttaatgttatggattgcttaacgtttgaatgtcacaaaataaaagt 480
Query: 1532 gaaattaaattgtacagcgatgctataccagatgaatatattttgtcattttgttaaata 1591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gaaattaaattgtacagcgatgctataccagatgaatatattttgtcattttgttaaata 540
Query: 1592 tttaataaattaatcattttta 1613
||||||||||||||||||||||
Sbjct: 541 tttaataaattaatcattttta 562
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 356,553
Number of extensions: 10719
Number of successful extensions: 10719
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 10717
Number of HSP's successfully gapped: 2
Length of query: 1840
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1823
Effective length of database: 8,119,229
Effective search space: 14801354467
Effective search space used: 14801354467
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)