BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21172 (UTR included)
(1696 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01049A1G04 799 0.0
>BF01049A1G04
Length = 669
Score = 799 bits (403), Expect = 0.0
Identities = 406/407 (99%)
Strand = Plus / Plus
Query: 398 agatatatatatcgggtgctaatgaataaataacggctgtgaatttgtacaaaactgcta 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 agatatatatatcgggtgctaatgaataaataacggctgtgaatttgtacaaaactgcta 128
Query: 458 cattttccaacataaaataggtttaagtataagatactggaaaatgttgataactgtgga 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 cattttccaacataaaataggtttaagtataagatactggaaaatgttgataactgtgga 188
Query: 518 aggagtgaagaacaagcaaatgaaaaggttcttagaacatggtacatatctccttattat 577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 aggagtgaagaacaagcaaatgaaaaggttcttagaacatggtacatatctccttattat 248
Query: 578 tttcctattagtgcctggtttcctgtattttgaactctgtgttgtgctaccaactgttgt 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcctattagtgcctggtttcctgtattttgaactctgtgttgtgctaccaactgttgt 308
Query: 638 agaagcttggactataccctattttgttcattacatttgtgcatcatttttgttactaaa 697
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 309 agaagcttggactataccctattttgttcattatatttgtgcatcatttttgttactaaa 368
Query: 698 tattgtaggtaacatgatatatgggatgtttacagacacaagcataaagggtagaaattt 757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tattgtaggtaacatgatatatgggatgtttacagacacaagcataaagggtagaaattt 428
Query: 758 ggacagtgttaataaagatggctggacgctatgttcagtgtgtgagg 804
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ggacagtgttaataaagatggctggacgctatgttcagtgtgtgagg 475
Score = 121 bits (61), Expect = 4e-27
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 190 atttgtcttttaactacaaaacttgtttaatatcagaatttcgttaaactatttatggaa 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 atttgtcttttaactacaaaacttgtttaatatcagaatttcgttaaactatttatggaa 69
Query: 250 g 250
|
Sbjct: 70 g 70
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 243,736
Number of extensions: 5250
Number of successful extensions: 5250
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5250
Number of HSP's successfully gapped: 2
Length of query: 1696
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1679
Effective length of database: 8,119,229
Effective search space: 13632185491
Effective search space used: 13632185491
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)