BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21174 (UTR included)
(1897 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01012B2A07 961 0.0
>BF01012B2A07
Length = 513
Score = 961 bits (485), Expect = 0.0
Identities = 507/513 (98%), Gaps = 1/513 (0%)
Strand = Plus / Plus
Query: 561 actgtactagctggacaccctatggacacaatcaaagtaaggttgcagactatgcctctc 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actgtactagctggacaccctatggacacaatcaaagtaaggttgcagactatgcctctc 60
Query: 621 cctaaacctggtgaagttgctttgtacgctggaacttgggattgttttaaaaaaactata 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cctaaacctggtgaagttgctttgtacgctggaacttgggattgttttaaaaaaactata 120
Query: 681 caaaaggaaggatttcgcgggctttataaaggaatgtcagctcctctgacaggagtcgca 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caaaaggaaggatttcgcgggctttataaaggaatgtcagctcctctgacaggagtcgca 180
Query: 741 ccaatttttgcaataagtttcttcggatttggacttggtaaaaaattaattaagtctgac 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccaatttttgcaataagtttcttcggatttggacttggtaaaaaattaattaagtctgac 240
Query: 801 gaaaatcaagttcttaccaagtcggaactgttcgcagccggtgcattttctggcattttc 860
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 241 gaaaatcaagttcttaccaagtcggaactgttcgcagccggtgcattttctggcatcttc 300
Query: 861 actacttctataatggcgcccggtgaacgtatcaaatgtttgctacaaattcagcaaggt 920
|||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 301 actacttccataatggcccccggtgaacgtatcaagtgtttgctacaaattcagcaaggt 360
Query: 921 gggaatgtacctcagaagtataatggtatgcttgactgtgccagacagctatatgcagag 980
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 361 gggaatgtacctcagaagtataatggtatgcttgactgtgccagacagctatatgcggag 420
Query: 981 ggtggtataaggagtatttataagggcagtgtggccacta-ttttaagagatgtgccagc 1039
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 421 ggtggtataaggagtatttataagggcagtgtggccactatttttaagagatgtgccagc 480
Query: 1040 cagcggcatgtatttcatgacctatgaatgggt 1072
|||||||||||||||||||||||||||||||||
Sbjct: 481 cagcggcatgtatttcatgacctatgaatgggt 513
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 286,356
Number of extensions: 6635
Number of successful extensions: 6635
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6634
Number of HSP's successfully gapped: 1
Length of query: 1897
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1880
Effective length of database: 8,119,229
Effective search space: 15264150520
Effective search space used: 15264150520
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)