BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21177 (UTR included)
(1927 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01055B1A06 1511 0.0
>BF01055B1A06
Length = 786
Score = 1511 bits (762), Expect = 0.0
Identities = 781/786 (99%), Gaps = 1/786 (0%)
Strand = Plus / Plus
Query: 400 gtagttgtaataacttacaatattccttgaaatttgcattatacatagaaatctcatgtt 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtagttgtaataacttacaatattccttgaaatttgcattatacatagaaatctcatgtt 60
Query: 460 tt-tttttaatttaatctcaataacaaattgtttctttaatcatgtataaaaggggctat 518
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttttttttaatttaatctcaataacaaattgtttctttaatcatgtataaaaggggctat 120
Query: 519 agcaattttgtgccagcagagtacacaactgaatttaagcaacatcgaagaaagctcatc 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agcaattttgtgccagcagagtacacaactgaatttaagcaacatcgaagaaagctcatc 180
Query: 579 gatggtgaaactgctagaaaactttatttggaagaagtatctcacgcttcaacccctcaa 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatggtgaaactgctagaaaactttatttggaagaagtatctcacgcttcaacccctcaa 240
Query: 639 atacatatagaacacacgactgaaacacaacccacgtgtaaacggaaaagaaaagtagat 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atacatatagaacacacgactgaaacacaacccacgtgtaaacggaaaagaaaagtagat 300
Query: 699 gacgacgaagtatctaaccaaaaattgtttgcttgtgcggagaacaatgatataaataca 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gacgacgaagtatctaaccaaaaattgtttgcttgtgcggagaacaatgatataaataca 360
Query: 759 atacggcacatcttagagacttatccagataagataaatacggtcgacagttatggatgg 818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atacggcacatcttagagacttatccagataagataaatacggtcgacagttatggatgg 420
Query: 819 agtttgctgatgatagcatgtcaagctaattctgttgatgttgttaaagaactgctcaaa 878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agtttgctgatgatagcatgtcaagctaattctgttgatgttgttaaagaactgctcaaa 480
Query: 879 tgtgatgttgattgttccattagagataaagctgggaattctgctcagagtttagttatt 938
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tatgatgttgattgttccattagagataaagctgggaattctgctcagagtttagttatt 540
Query: 939 aagaataaaaatgtctatctagccagtatactcttaaatcatagaaaagaatcttttatt 998
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 541 aagaataaaaatgtctatctagccaatacactcttaaatcatagaaaagaatcttttatt 600
Query: 999 gaaagtgtgaatgtacatacaaaatctaatgaaacatatcataagaaaaaaagcaaatat 1058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gaaagtgtgaatgtacatacaaaatctaatgaaacatatcataagaaaaaaagcaaatat 660
Query: 1059 acttgcacaatctgtgataacagaacatttgatagtaaagatgagcatctgtcatcaaca 1118
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 acttgcacaatctgtgataacagaacatttgatagtaaagatgagcatctgtcatcaacg 720
Query: 1119 atacacaatataaatgctagtaaaggaattaaagtacccacaaaatatgccatccccgaa 1178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 atacacaatataaatgctagtaaaggaattaaagtacccacaaaatatgccatccccgaa 780
Query: 1179 accaat 1184
||||||
Sbjct: 781 accaat 786
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 369,586
Number of extensions: 9316
Number of successful extensions: 9316
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9315
Number of HSP's successfully gapped: 1
Length of query: 1927
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1910
Effective length of database: 8,119,229
Effective search space: 15507727390
Effective search space used: 15507727390
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)