BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21178 (UTR included)
(2209 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01014A1E02 1291 0.0
BF01024A1H12 107 8e-23
>BF01014A1E02
Length = 675
Score = 1291 bits (651), Expect = 0.0
Identities = 669/675 (99%)
Strand = Plus / Plus
Query: 365 aagttcatatgtaaatattataaaaaccagctgttgacaattacattagtgttatcgtta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagttcatatgtaaatattataaaaaccagctgttgacaattacattagtgttatcgtta 60
Query: 425 ctgttatttcaaaggaggttttacatctacctcagctgtaatatatgaagttgtcattta 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgttatttcaaaggaggttttacatctacctcagctgtaatatatgaagttgtcattta 120
Query: 485 aagtatatattttaatatggaatgtacgaaggaacaaattgaacagaaacggttagcagc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagtatatattttaatatggaatgtacgaaggaacaaattgaacagaaacggttagcagc 180
Query: 545 tttgcagaaaagattatccaaaaataataaccacgtccctcatgcgccccaatgcacgaa 604
|||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 181 tttgcagaaaagattagccaaaaataataatcacgtccctcatgcgccccaatgcacgaa 240
Query: 605 accgtcagatcaaccagaacatttaaaacaggggcagtcaaaaaacaattctgctcatac 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 accgtcagatcaaccagaacatttaaaacaggggcagtcaaaaaacaattctgctcatac 300
Query: 665 ttttcatccatactcaagaccaaatagtagcaaacaatttacttcgacggttccagtatc 724
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 301 ttttcatccatactcaagaccaaatagtagcaaacaatttactacgacggttccagtatc 360
Query: 725 taatgttgtcacaggatccgtatatttgatatctgaagacagatttgaagtaaacatgtc 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taatgttgtcacaggatccgtatatttgatatctgaagacagatttgaagtaaacatgtc 420
Query: 785 agaattttgccctccacttataaatatcttcaaaactttaagatcaaggtcatatgattc 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agaattttgccctccacttataaatatcttcaaaactttaagatcaaggtcatatgattc 480
Query: 845 aaacactaagttgtggaattttttaatgagtgattatgagaatctgatgtccaaagttac 904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 481 aaacactaagttgtggaattttttaatgagtgattatgagaatctgatgtccaaagtaac 540
Query: 905 accgctcgcgcctcacattgttataggtcccctaccagcatttgttttgaagattctgaa 964
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 accgctcgcgcctcatattgttataggtcccctaccagcatttgttttgaagattctgaa 600
Query: 965 tgatcctcccattgatcatagtgctgtggatttaacaccaatcgaagcaacactaagaaa 1024
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 601 tgatcctcccattgatcatagtgctgtggatttaacaccaattgaagcaacactaagaaa 660
Query: 1025 taaactgttaccatt 1039
|||||||||||||||
Sbjct: 661 taaactgttaccatt 675
>BF01024A1H12
Length = 670
Score = 107 bits (54), Expect = 8e-23
Identities = 54/54 (100%)
Strand = Plus / Plus
Query: 1652 attcctcatccgccgcaccaaagaacaggtcctcaatctagaagagaagactcg 1705
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 attcctcatccgccgcaccaaagaacaggtcctcaatctagaagagaagactcg 106
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 251,648
Number of extensions: 4759
Number of successful extensions: 4759
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4759
Number of HSP's successfully gapped: 2
Length of query: 2209
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2192
Effective length of database: 8,119,229
Effective search space: 17797349968
Effective search space used: 17797349968
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)