BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21181 (UTR included)
(1789 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01012B1D09 1382 0.0
>BF01012B1D09
Length = 728
Score = 1382 bits (697), Expect = 0.0
Identities = 720/728 (98%)
Strand = Plus / Plus
Query: 460 tgttcttatttaccgaataacctttttataaagacggtaaaatgttagataatgttaagc 519
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 1 tgttcttatttaccgaataacctttttataaagnctgtaaaatgttagataatgttaagc 60
Query: 520 aagtaatattagttttatctggaaaaggtggagttggtaaatcgacagtaagcactcaat 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagtaatattagttttatctggaaaaggtggagttggtaaatcgacagtaagcactcaat 120
Query: 580 tagcactaacgcttaaagaaagggggttgaaggttggattacttgacatcgatttatgcg 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tagcactaacgcttaaagaaagggggttgaaggttggattacttgacatcgatttatgcg 180
Query: 640 gacccagtgttccatatctattaaatttagaggatcaaaacatacatcaaggacctgatg 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gacccagtgttccatatctattaaatttagaggatcaaaacatacatcaaggacctgatg 240
Query: 700 gatgggttccagtgtatttagatagtgaacagagactgggtgtcatgtccataggcttct 759
||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 241 gatggattccagtgtatttagatagtgaacagagactcggtgtcatgtccataggcttct 300
Query: 760 tactaaactcccgcaatgacgctgtcgtctggaggggtccaaaaaaaacatcaatgatta 819
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 301 tactaaactcccgcaatgacgctgtcgtctggagaggtccaaaaaaaacatcaatgatta 360
Query: 820 aacaattcctagaagatgtctcctggcaggatttagattttctagtaattgatactcctc 879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aacaattcctagaagatgtctcctggcaggatttagattttctagtaattgatactcctc 420
Query: 880 caggcacttcagacgagcacataacagtaatggaaaatctccgacaagtgcctcactgct 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caggcacttcagacgagcacataacagtaatggaaaatctccgacaagtgcctcactgct 480
Query: 940 ccgccattatagtcacaacaccacaagaagtggcaatagaggatgttcgcaaggaaataa 999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccgccattatagtcacaacaccacaagaagtggcaatagaggatgttcgcaaggaaataa 540
Query: 1000 ctttctgtaggaaaactaatataccaataatgggtataatagaaaacatgagcggatatg 1059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctttctgtaggaaaactaatataccaataatgggtataatagaaaacatgagcggatatg 600
Query: 1060 tctgtccaacatgtaccgaatgcacaaacatattttcaagcggcggaggtaagtcacttg 1119
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 601 tctgtccaacatgtaccgaatgcacaaacatattttcaagtggaggaggtaagtcacttg 660
Query: 1120 cggacttaacaaagattcagttcctaggcagtctgccaatagaccctagagtcggtaaac 1179
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 661 cggacttaacaaagattcagttcctaggcagtctgccgatagaccctagagtcggtaaac 720
Query: 1180 tggccggc 1187
||||||||
Sbjct: 721 tggccggc 728
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 302,458
Number of extensions: 8629
Number of successful extensions: 8629
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8629
Number of HSP's successfully gapped: 1
Length of query: 1789
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1772
Effective length of database: 8,119,229
Effective search space: 14387273788
Effective search space used: 14387273788
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)