BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21187 (UTR included)
(1648 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01040B2E11 938 0.0
>BF01040B2E11
Length = 525
Score = 938 bits (473), Expect = 0.0
Identities = 512/525 (97%)
Strand = Plus / Plus
Query: 571 atcatgaacatcaagatgtccacgacaatttggcgttggagaaacggtcgccacactata 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcatgaacatcaagatgtccacgacaatttggcgttggagaaacggtcgccacactata 60
Query: 631 acttcggcctcggaaaacgggcgtacagttacgtctcggaatacaaacggctgcctgtgt 690
||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 61 acttcgggctccgaaaacgggcgtacagttacgtctcggaatacaaacggcttcctgtgt 120
Query: 691 acaatttcggattaggaaaacgatcacgcccgtactcattcggtctcggcaaacgttcag 750
|| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acgatttcggattacgaaaacgatcacgcccgtactcattcggtctcggcaaacgttcag 180
Query: 751 tagaagacgatcagagcgatgaagagttcccaatggacattgaccaacctaccttgaccg 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tagaagacgatcagagcgatgaagagttcccaatggacattgaccaacctaccttgaccg 240
Query: 811 atatctttgaacagtatgacgaaatgccagtatacgacgcaaagagagctcgcccgtaca 870
||||||||||||||||||||||| |||| |||||||||||||| ||||||||||| ||||
Sbjct: 241 atatctttgaacagtatgacgaagtgccggtatacgacgcaaaaagagctcgcccataca 300
Query: 871 gtttcggtctgggcaaacggctatccgaaaatactgatgacgtggacgagaaacgcaccc 930
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 301 gtttcggtctgggcaaacggctatcctaaaatactgatgacgtggacgagaaacgcaccc 360
Query: 931 gcatgtacgacttcgggctcgggaaacgacctcagttgtacagcttcggtttgggaaaac 990
|||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 361 gcatgtacgacttcgggctcgggaaaagacctcagttgtacagcttcggtttgggcaaac 420
Query: 991 gagccaggaactacaatttcggtctcggtaaacgttacagcggcaaattcaacttcggcc 1050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gagccaggaactacaatttcggtctcggtaaacgttacagcggcaaattcaacttcggcc 480
Query: 1051 ttggaaagcgggagagggatcttcacaggtttagcttcggtctcg 1095
||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 481 ttggaaagcgggagagggatcttcacaggtttagctttggtctcg 525
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 207,092
Number of extensions: 5077
Number of successful extensions: 5077
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5074
Number of HSP's successfully gapped: 1
Length of query: 1648
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1631
Effective length of database: 8,119,229
Effective search space: 13242462499
Effective search space used: 13242462499
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)