BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21190 (UTR included)
(1711 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1169_C1 1673 0.0
>BF14_1169_C1
Length = 844
Score = 1673 bits (844), Expect = 0.0
Identities = 844/844 (100%)
Strand = Plus / Plus
Query: 232 tatttttgcgaaattaattcagattgtagctctattgaaagtttattgaaattatgtcat 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tatttttgcgaaattaattcagattgtagctctattgaaagtttattgaaattatgtcat 60
Query: 292 ttgtttatgttctctcaatgcgttcgtggtcaatgcagaaaattcactattgtttgacga 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgtttatgttctctcaatgcgttcgtggtcaatgcagaaaattcactattgtttgacga 120
Query: 352 tattcgactaagaatcgttgttgatagttacctagtgtcgattcgggagacatcttgtgt 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tattcgactaagaatcgttgttgatagttacctagtgtcgattcgggagacatcttgtgt 180
Query: 412 tgaaaaagttacaagttgttgtgcttgtctgattttgtctttcacgtgaaaagtttgcaa 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgaaaaagttacaagttgttgtgcttgtctgattttgtctttcacgtgaaaagtttgcaa 240
Query: 472 aatccggcctgtgcttagaaacagcagacatggacgtgtcgtgggatgctgataattttg 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aatccggcctgtgcttagaaacagcagacatggacgtgtcgtgggatgctgataattttg 300
Query: 532 aaccaaaacttccgaccacgttggcttccaataaatgggaaggcgaggacgaggaagaaa 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaccaaaacttccgaccacgttggcttccaataaatgggaaggcgaggacgaggaagaaa 360
Query: 592 cagtcaaggacagctgggaggatgaagaagaagaaaagaaagacgaagaaaagaaagaaa 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cagtcaaggacagctgggaggatgaagaagaagaaaagaaagacgaagaaaagaaagaaa 420
Query: 652 ccgtgccgcctcctccgaaacctaaaaagaaaattctagataaaattgctgaaaaagagc 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ccgtgccgcctcctccgaaacctaaaaagaaaattctagataaaattgctgaaaaagagc 480
Query: 712 gtctggaacgtcagaagtcagtgaaacaagttgtcgagaaagaagaattgaccccggaag 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtctggaacgtcagaagtcagtgaaacaagttgtcgagaaagaagaattgaccccggaag 540
Query: 772 agaagctggctgagaagctgcgtcagcagaaattacaagaggaatccgatttactgctgg 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agaagctggctgagaagctgcgtcagcagaaattacaagaggaatccgatttactgctgg 600
Query: 832 ccttggagacatttggtgtaacagacggagccggtaaactagattgcttccatccaacaa 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ccttggagacatttggtgtaacagacggagccggtaaactagattgcttccatccaacaa 660
Query: 892 ataaacaggagttcacagattttgcagagcttctgtgcaaaaaaatcaacatttacaaag 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ataaacaggagttcacagattttgcagagcttctgtgcaaaaaaatcaacatttacaaag 720
Query: 952 ccaaggatgaatttcccggatttgttgatgagctggtcaagaatattatagtacaaatgt 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaaggatgaatttcccggatttgttgatgagctggtcaagaatattatagtacaaatgt 780
Query: 1012 cgtccgcggatattaagaggataaagatgacagtcgacaatctgtacattgaaaaacaga 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 cgtccgcggatattaagaggataaagatgacagtcgacaatctgtacattgaaaaacaga 840
Query: 1072 aagc 1075
||||
Sbjct: 841 aagc 844
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 253,299
Number of extensions: 5757
Number of successful extensions: 5757
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5755
Number of HSP's successfully gapped: 1
Length of query: 1711
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1694
Effective length of database: 8,119,229
Effective search space: 13753973926
Effective search space used: 13753973926
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)