BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21208 (UTR included)
(2704 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01038A1D04 1427 0.0
>BF01038A1D04
Length = 780
Score = 1427 bits (720), Expect = 0.0
Identities = 756/768 (98%)
Strand = Plus / Plus
Query: 459 tattttagcatacatattgattcataagataagttggtaaaaatggcaacggcaatagac 518
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 13 tattttagcatacatattgattcattagataagttggtaaaaatggcaacggcaatagac 72
Query: 519 cagaaagcatatttaaaaaaatatctaacttctgcaccggacgaaaagaagaagaaaaag 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 cagaaagcatatttaaaaaaatatctaacttctgcaccggacgaaaagaagaagaaaaag 132
Query: 579 aaaaaaaacattaagggcaaggggttcaagataatagatgatgatttagacatatccaag 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 aaaaaaaacattaagggcaaggggttcaagataatagatgatgatttagacatatccaag 192
Query: 639 ctgagacctctcgacggagatgaattggacatatataatgagggtgaagatgctccacaa 698
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 193 ctgagacctctcgacggtgatgaattggacatatataatgagggtgaagatgctccgcaa 252
Query: 699 gttgtgggcatcgtagacgagagaccggaggaattgagaaagttagacggtgacagtaca 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 gttgtgggcatcgtagacgagagaccggaggaattgagaaagttagacggtgacagtaca 312
Query: 759 acaaaatggaaagttatcaaccaggatgacggtttcaatagtaagttgagagtggaagaa 818
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 313 acaaaatggaaagttatcaaccaggatgacggtttcaatagtaggttgaaagtggaagaa 372
Query: 819 attaagaaagacagaaaagaagttgagaaagaaaatgaaatagtgttcggtaaaatgtac 878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 attaagaaagacagaaaagaagttgagaaagaaaatgaaatagtgttcggtaaaatgtac 432
Query: 879 agtgattctgaggatgacaacaagaatgattcggatctaactccaccaaggaaaaatggt 938
|| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 433 agcgattctgaggatgacaacaagaatgattcggatctaactccgccaagaaaaaatggt 492
Query: 939 gataagataagtcaacgtagagacagtgattttagtccaccccggaagagaaataaatct 998
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 493 gataagataagtcaacgtagagacagtgattttagtccaccccgaaagagaaataaatct 552
Query: 999 aattcggactccgatatatcaccaccaagaagaaattctagaaagaatgaacatgatcat 1058
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 aattcggactccgacatatcaccaccaagaagaaattctagaaagaatgaacatgatcat 612
Query: 1059 agtcgacagaagaaaacaatgacggttaaatatgattctgatgtttcccctcctagaaga 1118
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 613 agtcgacagaagaaaacaatgactgttaaatatgattctgatgtttcccctcctagaaga 672
Query: 1119 aataaagatgatagatacacaaagaaacaaagcagaacacatcatgaacggactcagaag 1178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 aataaagatgatagatacacaaagaaacaaagcagaacacatcatgaacggactcagaag 732
Query: 1179 aattatgactctgatgtttcacctccaagaagagaaagtcatcagacg 1226
||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 733 aattatgactctgatgtatcacctccaagaagagaaagtcatcagacg 780
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 462,797
Number of extensions: 24082
Number of successful extensions: 24082
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 24081
Number of HSP's successfully gapped: 1
Length of query: 2704
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2687
Effective length of database: 8,119,229
Effective search space: 21816368323
Effective search space used: 21816368323
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)