BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21224 (UTR included)
(4213 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019B2C08 355 4e-97
>BF01019B2C08
Length = 677
Score = 355 bits (179), Expect = 4e-97
Identities = 179/179 (100%)
Strand = Plus / Minus
Query: 2275 aggcgttactcacgaacaattccctgcaacacctctatcttccgagatgttcaattggcg 2334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 aggcgttactcacgaacaattccctgcaacacctctatcttccgagatgttcaattggcg 298
Query: 2335 acgccggatgtttggcgatctgcaaagctgtcagatgcctgccaaacatccttaccatgg 2394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 acgccggatgtttggcgatctgcaaagctgtcagatgcctgccaaacatccttaccatgg 238
Query: 2395 acctcagcggctgcgagctgacggcgacaggagttgggtatatagcggacttgatcaag 2453
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 acctcagcggctgcgagctgacggcgacaggagttgggtatatagcggacttgatcaag 179
Score = 311 bits (157), Expect = 5e-84
Identities = 160/161 (99%)
Strand = Plus / Minus
Query: 2117 agcgaagacggtaaacaagcgcgccgtcattctcacaaaatttatgctcagcaacttgat 2176
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 658 agcgaagacggtaaacaagcgcgccgtcattctcacaaaatttatgctcagtaacttgat 599
Query: 2177 agaggcgatcgcacagttattatcaaacactacgcttctatcctcgctgctactcgaagg 2236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 agaggcgatcgcacagttattatcaaacactacgcttctatcctcgctgctactcgaagg 539
Query: 2237 tttacctttgagggttccgtatcttaactccatctgtgagg 2277
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 tttacctttgagggttccgtatcttaactccatctgtgagg 498
Score = 190 bits (96), Expect = 1e-47
Identities = 99/100 (99%)
Strand = Plus / Minus
Query: 2452 agtatcaaaaaatccaccggtacagtgaaaattgggtgcacacactccgctatcggcttc 2511
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 109 agtatcaaaaaatccaccggtacagtgaaaattgggtgcacacactccgctatcggctcc 50
Query: 2512 cggagctggacacaatggctggcctgaggaggatcagtct 2551
||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 cggagctggacacaatggctggcctgaggaggatcagtct 10
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 396,450
Number of extensions: 7020
Number of successful extensions: 7020
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7020
Number of HSP's successfully gapped: 3
Length of query: 4213
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4195
Effective length of database: 8,109,745
Effective search space: 34020380275
Effective search space used: 34020380275
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)