BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21226 (UTR included)
(2758 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2430_C1 123 2e-27
BF14_1645_C1 115 4e-25
BF01025B1E11 105 4e-22
BF14_1695_C1 105 4e-22
BF14_3240_C1 84 1e-15
BF01051A1D12 76 3e-13
BF01023A2A12 68 8e-11
>BF14_2430_C1
Length = 830
Score = 123 bits (62), Expect = 2e-27
Identities = 86/94 (91%)
Strand = Plus / Plus
Query: 78 tattcataagttaatcctgaatcgtgtctcctccattctacacgacattggcagaatata 137
||||||||||||||||| | ||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 138 tattcataagttaatcccggatcgtgtttcctccattctacacgacactggcagaatata 197
Query: 138 ctgtgcacgtctttgcacggatgagagccatatt 171
|||||||| |||||||||| |||| ||||||||
Sbjct: 198 ctgtgcacatctttgcacgtatgaaggccatatt 231
>BF14_1645_C1
Length = 793
Score = 115 bits (58), Expect = 4e-25
Identities = 91/102 (89%)
Strand = Plus / Plus
Query: 79 attcataagttaatcctgaatcgtgtctcctccattctacacgacattggcagaatatac 138
||||| |||||||||| | |||||| |||||||||||||||||||| |||||||||||||
Sbjct: 89 attcaaaagttaatcccggatcgtgcctcctccattctacacgacactggcagaatatac 148
Query: 139 tgtgcacgtctttgcacggatgagagccatattatataaaaa 180
|||||||||||| |||||| ||| |||||| |||| |||||
Sbjct: 149 tgtgcacgtcttggcacgggtgaaggccataatataaaaaaa 190
>BF01025B1E11
Length = 786
Score = 105 bits (53), Expect = 4e-22
Identities = 83/93 (89%)
Strand = Plus / Plus
Query: 79 attcataagttaatcctgaatcgtgtctcctccattctacacgacattggcagaatatac 138
||||| |||||||||| | ||||||| ||||||||||||||||| | ||||||||||||
Sbjct: 175 attcaaaagttaatcccggatcgtgtttcctccattctacacgatactggcagaatatat 234
Query: 139 tgtgcacgtctttgcacggatgagagccatatt 171
|||||||||| |||||||||||| ||||||||
Sbjct: 235 tgtgcacgtccttgcacggatgaaggccatatt 267
>BF14_1695_C1
Length = 1407
Score = 105 bits (53), Expect = 4e-22
Identities = 71/77 (92%)
Strand = Plus / Plus
Query: 106 tcctccattctacacgacattggcagaatatactgtgcacgtctttgcacggatgagagc 165
|||| ||||||||| |||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 1173 tccttcattctacatgacactggcagaatatactgtgcacgtctttgcacggatgaatgc 1232
Query: 166 catattatataaaaaaa 182
||||||||| |||||||
Sbjct: 1233 catattataaaaaaaaa 1249
>BF14_3240_C1
Length = 2110
Score = 83.8 bits (42), Expect = 1e-15
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 109 tccattctacacgacattggcagaatatactgtgcacgtctttgcacggatgagagccat 168
||||||||||||| || |||| ||||||||||||||| ||| ||||||||||| |||||
Sbjct: 1611 tccattctacacggcactggcggaatatactgtgcacttctctgcacggatgaaggccat 1670
Query: 169 attatataaaaaaa 182
||||||| ||||||
Sbjct: 1671 attatattaaaaaa 1684
>BF01051A1D12
Length = 812
Score = 75.8 bits (38), Expect = 3e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 84 taagttaatcctgaatcgtgtctcctccattctacacgacattggcagaatatactgtgc 143
||||||||||| | ||||||||| || || |||||||||| |||||||||| ||||| |
Sbjct: 205 taagttaatcccggatcgtgtctaatctatgctacacgacactggcagaatagactgtac 264
Query: 144 acgtctttgcacggatga 161
||||| ||||||||||||
Sbjct: 265 acgtccttgcacggatga 282
>BF01023A2A12
Length = 723
Score = 67.9 bits (34), Expect = 8e-11
Identities = 50/54 (92%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 1 gctctaaccttctccatgttaaaaagaggcctttgctcagcagtgggctccgat 54
||||||||||||||||||| | || |||||||||||||||||||| ||||||||
Sbjct: 276 gctctaaccttctccatgtgataa-gaggcctttgctcagcagtgagctccgat 328
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 358,136
Number of extensions: 8423
Number of successful extensions: 8423
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 8422
Number of HSP's successfully gapped: 7
Length of query: 2758
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2741
Effective length of database: 8,119,229
Effective search space: 22254806689
Effective search space used: 22254806689
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)