BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21228 (UTR included)
(2446 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01053B1E11 1435 0.0
>BF01053B1E11
Length = 764
Score = 1435 bits (724), Expect = 0.0
Identities = 754/764 (98%)
Strand = Plus / Plus
Query: 983 cccctcggactaccaagccccggggttcctcagtaccgatgaatccgaggaccacctgga 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cccctcggactaccaagccccggggttcctcagtaccgatgaatccgaggaccacctgga 60
Query: 1043 gccctatctggtagacgccatcaagctgggctgggtggaaactccttaccataagctcat 1102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gccctatctggtagacgccatcaagctgggctgggtggaaactccttaccataagctcat 120
Query: 1103 agcgagatccttcatcaaggaacacgtcctcgcaagccacgaggctatcccttcacagaa 1162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agcgagatccttcatcaaggaacacgtcctcgcaagccacgaggctatcccttcacagaa 180
Query: 1163 ccgtccgatactatccaacgaggttcaagcttccggctccaacatcgcacctgacaccga 1222
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccgtccgatactatccaacgaggctcaagcttccggctccaacatcgcacctgacaccga 240
Query: 1223 tatccaaatagtctgtccctgtaacagacatgaagagggatgtgacgtcagcgagctgct 1282
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 241 tatccaaatagtctgtccctgtaacagacatgaagacggatgtgacgtcagcgagctgct 300
Query: 1283 caagtgtctgttctgcggcacgtaccagcacgcgtgttgttacggcgtgtgtgacgtcac 1342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caagtgtctgttctgcggcacgtaccagcacgcgtgttgttacggcgtgtgtgacgtcac 360
Query: 1343 ggccgccgcgtctcactgctgtgtgtcctgttatcaaacagacacacacaggactcccac 1402
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 361 cgccgccgcgtctcactgctgtgtgtcctgttatcaaacagacacacacaggacacccac 420
Query: 1403 tgataagaagctcgccactctcacacacgccaagagagagagcctgtgtatattccgccg 1462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgataagaagctcgccactctcacacacgccaagagagagagcctgtgtatattccgccg 480
Query: 1463 cacgttggagtggtgcgccagaataccaagcatagatggcgcgagcatatcacagaggtt 1522
||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 481 cacgttgcagtggtgcgccagactgccaagcatagatggcgcgagcatatcacagaggtt 540
Query: 1523 ccgcatatcagagacgaacgcccacaagctgatgagactgctgcactcacacggagtgct 1582
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 541 ccgcatatcagagacgaacgcccacaagctgatgaggctgctgcactcacacggagtgct 600
Query: 1583 gcccgaggaacccaccgattcgaaaacgccgcagaagataataacggtggcgcttaattc 1642
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 601 gcccgaggaacccaccgattcgaaaacgccgcagaagataataacagtggcccttaattc 660
Query: 1643 ggtcatgtccaaattcttcaatatgaacagagatgttgtggagcggctcctggccgaaac 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ggtcatgtccaaattcttcaatatgaacagagatgttgtggagcggctcctggccgaaac 720
Query: 1703 cctgctggaggagtctgacccgctttcgggggtcatcagcccct 1746
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cctgctggaggagtctgacccgctttcgggggtcatcagcccct 764
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 259,254
Number of extensions: 5393
Number of successful extensions: 5393
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5393
Number of HSP's successfully gapped: 1
Length of query: 2446
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2429
Effective length of database: 8,119,229
Effective search space: 19721607241
Effective search space used: 19721607241
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)