BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21233 (UTR included)
(2392 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2849_C1 541 e-153
>BF14_2849_C1
Length = 852
Score = 541 bits (273), Expect = e-153
Identities = 288/293 (98%)
Strand = Plus / Minus
Query: 2100 tagttagcaaaaggggtcaagagtttatttgtgttatgtcatagagactattttaatact 2159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 tagttagcaaaaggggtcaagagtttatttgtgttatgtcatagagactattttaatact 793
Query: 2160 tcgtgcaatggaccataaacggccgacagcagttcgggtgcagttaagaattaaaaattg 2219
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 792 tcgtgcaatggaccataaacggccgacagcagttcgggagcagttaagaattaaaaattg 733
Query: 2220 ccaaatcaacaaaccggacacttcgactcgtctcgaatggatacgcgatagaaatgcatt 2279
|||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 732 ccaaatcaactaactggacacttcgactcgtctcgaatggatacgcgatggaaatgcatt 673
Query: 2280 ttgttaattaatttaattgtgtacttttatgtttatatttttataaccatagatgaaaaa 2339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 ttgttaattaatttaattgtgtacttttatgtttatatttttataaccatagatgaaaaa 613
Query: 2340 gaaacgtttgaacacacgtgagttatctcgtcttccattaatttttttttttt 2392
||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 612 gaaacgtttgaacacacgtgagttatctcgtcttccattaaattttttttttt 560
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 312,754
Number of extensions: 19585
Number of successful extensions: 19585
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 19585
Number of HSP's successfully gapped: 1
Length of query: 2392
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2375
Effective length of database: 8,119,229
Effective search space: 19283168875
Effective search space used: 19283168875
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)