BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21238 (UTR included)
(2533 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2922_C1 904 0.0
BF01062A1C12 250 9e-66
>BF14_2922_C1
Length = 739
Score = 904 bits (456), Expect = 0.0
Identities = 465/468 (99%)
Strand = Plus / Plus
Query: 298 agatgagtgatgaaattttatggcatatacagctagaccatcatcgatttatttgattaa 357
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 272 agatgagtgatgaaattttatggcatatacagctagaccatcatagatttatttgattaa 331
Query: 358 gtatatttataagtcggagtggtgcttcagactagagtaagatgataacaaggagatggt 417
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 332 gtatatttataagtcggagtggtgcttcagactagagtaagatgataacaaggcgatggt 391
Query: 418 tccatccctcactgaatggtatagatgcagaaaagttattattagataaaggcagagacg 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tccatccctcactgaatggtatagatgcagaaaagttattattagataaaggcagagacg 451
Query: 478 gctacttccttgccaggcccagtatgagcaataaaggtgactttacactgtctgtgagaa 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 gctacttccttgccaggcccagtatgagcaataaaggtgactttacactgtctgtgagaa 511
Query: 538 gagggacggcgataacacacattaaaattcagaacaatggtgaattcctcgatctgtatg 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 gagggacggcgataacacacattaaaattcagaacaatggtgaattcctcgatctgtatg 571
Query: 598 gtggagagaaatttgctaccttgtctgaactcgttcaattttatatggataatcagggtc 657
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 572 gtggagagaaatttgctaccttgtctgaactcgttcaattttatatggacaatcagggtc 631
Query: 658 agttacgtgagaagaatggaaatataatcagacttaagactcctttaaactgcgccgatc 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 agttacgtgagaagaatggaaatataatcagacttaagactcctttaaactgcgccgatc 691
Query: 718 ctaccacggaacgttggtatcacggacagctcactgccaaggaagctg 765
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 ctaccacggaacgttggtatcacggacagctcactgccaaggaagctg 739
>BF01062A1C12
Length = 815
Score = 250 bits (126), Expect = 9e-66
Identities = 129/130 (99%)
Strand = Plus / Plus
Query: 2404 agactttagtactaacagtctataaataatactatatcgctaattgttactcgggacatg 2463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agactttagtactaacagtctataaataatactatatcgctaattgttactcgggacatg 60
Query: 2464 attatttttcctcatacaatgctaattctaatacgtcactgtgtaatttttttaatgtat 2523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attatttttcctcatacaatgctaattctaatacgtcactgtgtaatttttttaatgtat 120
Query: 2524 aaaacgaaat 2533
||||| ||||
Sbjct: 121 aaaacaaaat 130
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 352,486
Number of extensions: 21305
Number of successful extensions: 21305
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 21305
Number of HSP's successfully gapped: 2
Length of query: 2533
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2516
Effective length of database: 8,119,229
Effective search space: 20427980164
Effective search space used: 20427980164
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)