BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21246 (UTR included)
(2473 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_483_C1 1065 0.0
BF01059A2E09 726 0.0
BF01023A2A12 107 8e-23
BF01056B1D02 101 5e-21
BF01037B1H08 92 5e-18
BF01040A1G09 80 2e-14
BF01062A1A05 72 5e-12
>BF14_483_C1
Length = 2529
Score = 1065 bits (537), Expect = 0.0
Identities = 571/581 (98%), Gaps = 1/581 (0%)
Strand = Plus / Plus
Query: 577 taaatttgcccgtactatcttatggatgtagcgttgggtggatgtcccctatgacacttc 636
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1950 taaatttgcccgtactatcttatggatgtagcgttgggtggatgtcacctatgacacttc 2009
Query: 637 ttctgcagtcaaaagattcacccagagggacccctttaaccgatttagaggtgtcatgga 696
|||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 2010 ttctgcagtcaaaaaattcacccaaagggacccctttaaccgatttaaaggtgtcatgga 2069
Query: 697 tggcatcagttccatacttggtttgcatcccatgtgatcttctcatggctgtcataacag 756
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2070 tggcatcagttccatacttggtttgcatcccatgtgatcttctcatggctgtcataacaa 2129
Query: 757 ataagtgggggaggaaaacagctttgatacttatatcgatatcatcagcgataagttgga 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2130 ataagtgggggaggaaaacagctttgatacttatatcgatatcatcagcgataagttgga 2189
Query: 817 ttcttcttctctcgtccttcaacatttgggtcttgattctgggccgagcgctagttggga 876
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2190 ttcttctcctctcgtccttcaacatttgggtcttgattctgggccgagcgctagttggga 2249
Query: 877 tcagtatggcaggttcctacgttacgtgccctatttacaccaaggaaataagtgatgaca 936
|||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 2250 tcagtatggcaggttcctacgtcacgtgccctatttacaccaaggaaataagcgatgaca 2309
Query: 937 acatccgaggcgccttgggatgcttggttattcttttccaaacaaccggcaacctctttt 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2310 acatccgaggcgccttgggatgcttggttattcttttccaaacaaccggcaacctctttt 2369
Query: 997 tgtatattataggggatattttaagttataactctatactctggatatgtctagctattc 1056
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2370 tgtatattataggggata-attaagttataactctatactctggatatgtctagctattc 2428
Query: 1057 ctgggatacatatactgttgttcatactaatgcctgattccccttcctacctgctcaaga 1116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2429 ctgggatacatatactgttgttcatactaatgcctgattccccttcctacctgctcaaga 2488
Query: 1117 aaggaagaattgaggataccaccagagccttatcatggctg 1157
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 2489 aaggaagaattgaggataccaccagagccttatcatggctg 2529
>BF01059A2E09
Length = 870
Score = 726 bits (366), Expect = 0.0
Identities = 381/386 (98%)
Strand = Plus / Plus
Query: 577 taaatttgcccgtactatcttatggatgtagcgttgggtggatgtcccctatgacacttc 636
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 443 taaatttgcccgtactatcttatggatgtagcgttgggtggatgtcacctatgacacttc 502
Query: 637 ttctgcagtcaaaagattcacccagagggacccctttaaccgatttagaggtgtcatgga 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ttctgcagtcaaaagattcacccagagggacccctttaaccgatttagaggtgtcatgga 562
Query: 697 tggcatcagttccatacttggtttgcatcccatgtgatcttctcatggctgtcataacag 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tggcatcagttccatacttggtttgcatcccatgtgatcttctcatggctgtcataacag 622
Query: 757 ataagtgggggaggaaaacagctttgatacttatatcgatatcatcagcgataagttgga 816
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 623 ataagtgggggaggaaaacagctttgatacttatatcgatatcgtcagcgataagttgga 682
Query: 817 ttcttcttctctcgtccttcaacatttgggtcttgattctgggccgagcgctagttggga 876
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ttcttctcctctcgtccttcaacatttgggtcttgattctgggccgagcgctagttggga 742
Query: 877 tcagtatggcaggttcctacgttacgtgccctatttacaccaaggaaataagtgatgaca 936
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 743 tcagtatggcaggttcctacgtcacgtgccctatttacaccaaggaaataagtgatgaca 802
Query: 937 acatccgaggcgccttgggatgcttg 962
||||||| ||||||||||||||||||
Sbjct: 803 acatccgcggcgccttgggatgcttg 828
Score = 85.7 bits (43), Expect = 3e-16
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 1050 gctattcctgggatacatatactgttgttcatactaatgcctg 1092
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828 gctattcctgggatacatatactgttgttcatactaatgcctg 870
>BF01023A2A12
Length = 723
Score = 107 bits (54), Expect = 8e-23
Identities = 63/66 (95%)
Strand = Plus / Minus
Query: 511 tatcatcatcatcatcagcctataggagcccactgctgagcaaaggcctcttctcacatg 570
||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||
Sbjct: 349 tatcatcatcatcatcagcctatcggagctcactgctgagcaaaggcctcttatcacatg 290
Query: 571 gagaag 576
||||||
Sbjct: 289 gagaag 284
>BF01056B1D02
Length = 778
Score = 101 bits (51), Expect = 5e-21
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 512 atcatcatcatcatcagcctataggagcccactgctgagcaaaggcctcttctcacatg 570
|||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 746 atcatcattatcatcagcctatcggagcccactgctgagcaaaggcctcttctcacatg 688
>BF01037B1H08
Length = 758
Score = 91.7 bits (46), Expect = 5e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 515 atcatcatcatcagcctataggagcccactgctgagcaaaggcctcttctcacatggaga 574
||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||| |||
Sbjct: 349 atcatcaccatcagcctatcggagcccacagctgagcaaaggcctcttctcacatgtaga 290
Query: 575 ag 576
||
Sbjct: 289 ag 288
>BF01040A1G09
Length = 753
Score = 79.8 bits (40), Expect = 2e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 513 tcatcatcatcatcagcctataggagcccactgctgagcaaaggcctcttctcacatgga 572
||||||||||||||||||||| ||| ||||||||||||| | |||||||||| ||||||
Sbjct: 139 tcatcatcatcatcagcctatcggaagccactgctgagcataagcctcttctcgcatgga 80
Query: 573 gaag 576
||||
Sbjct: 79 gaag 76
>BF01062A1A05
Length = 777
Score = 71.9 bits (36), Expect = 5e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 533 taggagcccactgctgagcaaaggcctcttctcacatggagaag 576
||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 588 taggagcccactgctaagcaaaggcctcttctcacaaggagaag 545
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 314,823
Number of extensions: 6728
Number of successful extensions: 6728
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 6724
Number of HSP's successfully gapped: 8
Length of query: 2473
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2456
Effective length of database: 8,119,229
Effective search space: 19940826424
Effective search space used: 19940826424
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)