BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21258 (UTR included)
(1561 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_736_C1 196 7e-50
BF01054B2B08 135 2e-31
BF01052B2H04 135 2e-31
BF01031B1D09 133 9e-31
BF01059A2H01 123 9e-28
BF01011A1B08 98 5e-20
BF01059B2F03 96 2e-19
BF01020B1H07 80 1e-14
BF14_2467_C1 78 5e-14
BF01026A1A12 72 3e-12
BF14_2193_C1 68 5e-11
>BF14_736_C1
Length = 796
Score = 196 bits (99), Expect = 7e-50
Identities = 164/183 (89%), Gaps = 2/183 (1%)
Strand = Plus / Minus
Query: 541 ccttgatttttgaggaaaaaggaaggggtgggaataagaaaattggaggaaagggagggt 600
|||||||| ||||| ||||||| ||||||||||||||| |||| | ||||||||| | |
Sbjct: 796 ccttgattgttgag-aaaaagggaggggtgggaataaggaaatggcaggaaagggtgaga 738
Query: 601 atggggaaagggcaaccggctctctcactaatcggacgaaacgcagcca-taaaggctac 659
| | ||||||||||||||||||||||||| || |||||||||||||||| ||||| ||||
Sbjct: 737 acgcggaaagggcaaccggctctctcactcattggacgaaacgcagccactaaagactac 678
Query: 660 ttcatgccgatcttctgtgagagggtgttacttccccggtcgagccagcctatgttccag 719
|||| |||||||||||||||||||||| |||||||||||||||||||||| |||||| ||
Sbjct: 677 ttcacgccgatcttctgtgagagggtggtacttccccggtcgagccagcccatgttcgag 618
Query: 720 ctg 722
|||
Sbjct: 617 ctg 615
>BF01054B2B08
Length = 807
Score = 135 bits (68), Expect = 2e-31
Identities = 157/184 (85%), Gaps = 2/184 (1%)
Strand = Plus / Minus
Query: 524 tgcggatgcgttgccaaccttgatttttgaggaaaaaggaaggggtgggaataagaaaat 583
|||||||||||||||||||||| || || ||||| ||| ||||||||||||| | ||
Sbjct: 807 tgcggatgcgttgccaaccttggttgtttaggaagtggga-ggggtgggaataaagagat 749
Query: 584 tggaggaaagggagggtatggggaaagggcaaccggctctctcactaatcggacgaaacg 643
| ||||||||| ||| | |||||||||||||||||||||||||| |||| ||||||||
Sbjct: 748 ggcaggaaagggtgggaacagggaaagggcaaccggctctctcactcatcgaacgaaacg 689
Query: 644 cagcca-taaaggctacttcatgccgatcttctgtgagagggtgttacttccccggtcga 702
|||||| ||||| || ||| | ||||||||||||||||||| | ||| |||||||||||
Sbjct: 688 cagccattaaagactgctttacgccgatcttctgtgagaggctagtacatccccggtcga 629
Query: 703 gcca 706
||||
Sbjct: 628 gcca 625
>BF01052B2H04
Length = 668
Score = 135 bits (68), Expect = 2e-31
Identities = 238/288 (82%), Gaps = 5/288 (1%)
Strand = Plus / Plus
Query: 436 ttttttatgtgaaaggtggctaacgagtagacggcttacattatgggcaggagtgaccgc 495
|||||||||| ||||||||| |||||| ||||||| ||| | ||||||| || ||||
Sbjct: 159 ttttttatgttaaaggtggcaaacgagcagacggcctacttggtgggcagcagctaccgt 218
Query: 496 tgcccatggacatccgctacataaattttgcggatgcgttgccaaccttgatttttgagg 555
||||||||||| |||| ||| | |||||||||||||||||| |||| ||| | |||
Sbjct: 219 cgcccatggacacccgc-acaactctgttgcggatgcgttgccaagcttgttttat-agg 276
Query: 556 aaaaaggaaggggtgggaataagaaaattggaggaaagggagggtatggggaaagggcaa 615
|| | ||||||| |||||||||| ||| |||||| || ||| || ||||||||||||
Sbjct: 277 aatagggaaggg-tgggaataagggaatgtcaggaaaaggtgggaatagggaaagggcaa 335
Query: 616 ccggctctctcactaatcggacgaaacgcagccat-aaaggctacttcatgccgatcttc 674
|||| ||||| ||| |||||||||| |||| || ||||||||||||| |||| ||||
Sbjct: 336 ccggttctctgactcatcggacgaatt-cagcaattaaaggctacttcaaaccgagcttc 394
Query: 675 tgtgagagggtgttacttccccggtcgagccagcctatgttccagctg 722
|||||||||||| ||||||||||| |||||||||| |||||| |||||
Sbjct: 395 tgtgagagggtggtacttccccggacgagccagcccatgttcgagctg 442
>BF01031B1D09
Length = 754
Score = 133 bits (67), Expect = 9e-31
Identities = 122/139 (87%), Gaps = 1/139 (0%)
Strand = Plus / Minus
Query: 588 ggaaagggagggtatggggaaagggcaaccggctctctcactaatcggacgaaacgcagc 647
|||||||||||| | |||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 636 ggaaagggagggaaaagggaaagggccgccggctctctcactcgtcggacgaaacgcagc 577
Query: 648 cataaa-ggctacttcatgccgatcttctgtgagagggtgttacttccccggtcgagcca 706
|||||| |||||||||| ||||||| |||||||||||||| ||||| ||| ||| |||||
Sbjct: 576 cataaaaggctacttcacgccgatcgtctgtgagagggtggtacttgccccgtcaagcca 517
Query: 707 gcctatgttccagctgcag 725
||| ||||| ||||||||
Sbjct: 516 gcccttgttcgagctgcag 498
>BF01059A2H01
Length = 865
Score = 123 bits (62), Expect = 9e-28
Identities = 96/106 (90%), Gaps = 1/106 (0%)
Strand = Plus / Plus
Query: 604 gggaaagggcaaccggctctctcactaatcggacgaaacgcagccat-aaaggctacttc 662
||||||||||||| |||||||||||| |||||| ||| ||||||||| |||| ||||| |
Sbjct: 200 gggaaagggcaactggctctctcactcatcggaagaatcgcagccattaaagactactcc 259
Query: 663 atgccgatcttctgtgagagggtgttacttccccggtcgagccagc 708
|||||||||||||||||||||||| ||||||| ||||| |||||||
Sbjct: 260 atgccgatcttctgtgagagggtggtacttccacggtcaagccagc 305
>BF01011A1B08
Length = 853
Score = 97.6 bits (49), Expect = 5e-20
Identities = 98/113 (86%), Gaps = 1/113 (0%)
Strand = Plus / Plus
Query: 604 gggaaagggcaaccggctctctcactaatcggacgaaacgcagccataaagg-ctacttc 662
|||||||||||| ||||| ||||| | ||| |||||||||||| ||| || | |||||||
Sbjct: 28 gggaaagggcaaacggctttctcattcatcagacgaaacgcagtcattaatgactacttc 87
Query: 663 atgccgatcttctgtgagagggtgttacttccccggtcgagccagcctatgtt 715
| ||||||||||||||||||| || ||||| ||| |||||||||||| |||||
Sbjct: 88 acgccgatcttctgtgagaggatggtacttgccccgtcgagccagcccatgtt 140
>BF01059B2F03
Length = 703
Score = 95.6 bits (48), Expect = 2e-19
Identities = 82/92 (89%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 626 cactaatcggacgaaacgcagccat-aaaggctacttcatgccgatcttctgtgagaggg 684
|||| |||||||||||| ||||||| ||||||||||||| |||||||||||||||| |||
Sbjct: 1 cactcatcggacgaaactcagccattaaaggctacttcacgccgatcttctgtgaggggg 60
Query: 685 tgttacttccccggtcgagccagcctatgttc 716
|| | ||||||| ||||||||||| ||||||
Sbjct: 61 tggtcattccccgctcgagccagcccatgttc 92
>BF01020B1H07
Length = 733
Score = 79.8 bits (40), Expect = 1e-14
Identities = 86/100 (86%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 617 cggctctctcactaatcggacgaaacgcagccataaagg-ctacttcatgccgatcttct 675
||||| ||||| | ||| |||||||||||| ||| || | |||||||| |||||||||||
Sbjct: 3 cggctttctcattcatcagacgaaacgcagtcattaatgactacttcacgccgatcttct 62
Query: 676 gtgagagggtgttacttccccggtcgagccagcctatgtt 715
|||||||| || ||||| ||| |||||||||||| |||||
Sbjct: 63 gtgagaggatggtacttgccccgtcgagccagcccatgtt 102
>BF14_2467_C1
Length = 1121
Score = 77.8 bits (39), Expect = 5e-14
Identities = 88/103 (85%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 608 aagggcaaccggctctctcactaatcggacgaaacgcagccat-aaaggctacttcatgc 666
||||||||||| |||||||| ||||||||||| ||||||| |||| |||||||| ||
Sbjct: 344 aagggcaaccgagcctctcactcatcggacgaaaaacagccattaaagactacttcacgc 285
Query: 667 cgatcttctgtgagagggtgttacttccccggtcgagccagcc 709
||||||||||||||| |||| || |||| | ||||||| ||||
Sbjct: 284 cgatcttctgtgagaaggtggtaattccacagtcgagctagcc 242
>BF01026A1A12
Length = 759
Score = 71.9 bits (36), Expect = 3e-12
Identities = 88/103 (85%), Gaps = 3/103 (2%)
Strand = Plus / Minus
Query: 608 aagggcaaccggctctctcactaatcggacgaaacgcagccat-aaaggctacttcatgc 666
||||||||||||||||| ||| ||| ||||||| ||||||| ||||||||||||| ||
Sbjct: 503 aagggcaaccggctctc--actcatcagacgaaaaacagccattaaaggctacttcacgc 446
Query: 667 cgatcttctgtgagagggtgttacttccccggtcgagccagcc 709
|||||||||| ||| ||||| || |||| | ||||||| ||||
Sbjct: 445 cgatcttctgggagggggtggtaattccacagtcgagctagcc 403
>BF14_2193_C1
Length = 1301
Score = 67.9 bits (34), Expect = 5e-11
Identities = 86/102 (84%), Gaps = 1/102 (0%)
Strand = Plus / Minus
Query: 604 gggaaagggcaaccggctctctcactaatcggacgaaacgcagcca-taaaggctacttc 662
|||||||||||||||||| | ||| | ||| ||||||||||||||| | || ||||||
Sbjct: 332 gggaaagggcaaccggctatttcattcatcagacgaaacgcagccattggagactactta 273
Query: 663 atgccgatcttctgtgagagggtgttacttccccggtcgagc 704
| ||| || ||| |||||||| || |||||||||||||||||
Sbjct: 272 acgccaattttccgtgagaggatggtacttccccggtcgagc 231
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 242,667
Number of extensions: 5851
Number of successful extensions: 5851
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 5838
Number of HSP's successfully gapped: 13
Length of query: 1561
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1544
Effective length of database: 8,119,229
Effective search space: 12536089576
Effective search space used: 12536089576
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)