BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21284 (UTR included)
(1798 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2583_C1 767 0.0
>BF14_2583_C1
Length = 1231
Score = 767 bits (387), Expect = 0.0
Identities = 411/419 (98%)
Strand = Plus / Plus
Query: 587 accggcgtccgtgttggcagcggcgggcggcgcgcgagcctccttcctgcagcgtgagaa 646
|||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 813 accggcgtccgtgttggcggcggcgggcggcgcgcgagcctccttcttgcagcgtgagaa 872
Query: 647 gccttacagacagaaactcaaacagatcgccaaacaacaaccgcaaccgttcgtggtccg 706
||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 873 gccgtacagacagaaactcaaacagatcgccaaacaacaaccacaaccgttcgtggtccg 932
Query: 707 aggtcaccacctccaactccaagccctcacctccgtggctcactgtcaccactgcgacct 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933 aggtcaccacctccaactccaagccctcacctccgtggctcactgtcaccactgcgacct 992
Query: 767 cgtcatctggggtctcgctccgcaggcctatgtctgtacagactgtaagctacgcgtgca 826
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 993 cgtcatctggggtctcgctccgcaggcctatgtctgtacagactgtaagctccgcgtgca 1052
Query: 827 ccgctcctgcgctcgctccgtggaggaaggctgctgcctggacggggaacactccaacaa 886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1053 ccgctcctgcgctcgctccgtggaggaaggctgctgcctggacggggaacactccaacaa 1112
Query: 887 ccgcatctccaggttcatggagaggatacatccgctgcccggtcaggactccagcgagaa 946
||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1113 ccgtatctccaggttcatggagaggatacatccgctgtccggtcaggactccagcgagaa 1172
Query: 947 gaagtcgaggaagtcgtcggggacggcgcacttcctgaacatggagcgcagtttccgta 1005
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1173 gaagtcgaggaaatcgtcggggacggcgcacttcctgaacatggagcgcagtttccgta 1231
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 198,724
Number of extensions: 4580
Number of successful extensions: 4580
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4580
Number of HSP's successfully gapped: 1
Length of query: 1798
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1781
Effective length of database: 8,119,229
Effective search space: 14460346849
Effective search space used: 14460346849
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)