BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21293 (UTR included)
(1519 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2825_C1 1316 0.0
BF01049B1F01 78 5e-14
BF01019A1H08 78 5e-14
BF14_335_C4 76 2e-13
>BF14_2825_C1
Length = 1895
Score = 1316 bits (664), Expect = 0.0
Identities = 694/703 (98%), Gaps = 2/703 (0%)
Strand = Plus / Plus
Query: 560 ggaaaaaatattcaagtttcagcatacttcaacaacatcgtatatggcaatggtatctga 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35 ggaaaaaatattcaagtttcagcatacttcaacaacatcgtatatggcaatggtatctga 94
Query: 620 agctaagatgaacggagctcctggcgctccggcggaggtattgccagcgttggcggagca 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 agctaagatgaacggagctcctggcgctccggcggaggtattgccagcgttggcggagca 154
Query: 680 ccccgcgggcctaccgccgggagaatactcgctggttggctgggatatggacacgacggg 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 ccccgcgggcctaccgccgggagaatactcgctggttggctgggatatggacacgacggg 214
Query: 740 tagaagactgattgatgaaatatgccagattgcagcgtatacaccgaaacagacttactc 799
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 aagaagactcattgatgaaatatgccagattgcagcgtatacaccgaaacagacttactc 274
Query: 800 tcagtacataatgccatacggggacctcaaccctggagctcggagacgacacaatgttcg 859
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 275 tcagtacataatgccatacggggacctcaaccctggagctcggagacgatacaatgttcg 334
Query: 860 tgtcgtcaccgtcgggagatatagaatgttgaaggataccattactcataagatattaaa 919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 335 tgtcgtcaccgtcgggagatatagaatgttgaaggataccattactcataagatatt--a 392
Query: 920 aactaaatctgaaatatcagctctcacagacttcctggactggttggagaaggagaaagg 979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 aactaaatctgaaatatcagctctcacagacttcctggactggttggagaaggagaaagg 452
Query: 980 ggacggcagtgttatattaatctaccatgagccgagacggttgagtccaaccatgctttt 1039
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ggacggcagtgttatattaatctaccatgagccgagacggttgagtccaaccatgctttt 512
Query: 1040 agaagccctgactcgttacaaactattggatcgtttcaagtccatagtggccggattcac 1099
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ggaagccctgactcgttacaaactattggatcgtttcaagtccatagtggccggattcac 572
Query: 1100 tgacagttatgctttagccgccgataaatgcaagtccacggtgaagtcggtgtcgttgag 1159
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 573 tgacagttatgctttagccgccgataaatgcaagtccacggtgaaatcggtgtcgttaag 632
Query: 1160 aatgttggcacgagttctgctcgatgccgattccttgtcagtggatagcgctcttgatag 1219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 aatgttggcacgagttctgctcgatgccgattccttgtcagtggatagcgctcttgatag 692
Query: 1220 agcgaccgcggcttatagaattgttgaacatttagctcaaggt 1262
|||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 693 agcgacagcggcttatagaattgttgaacatttagctcaaggt 735
>BF01049B1F01
Length = 840
Score = 77.8 bits (39), Expect = 5e-14
Identities = 49/51 (96%), Gaps = 1/51 (1%)
Strand = Plus / Minus
Query: 1337 cctacacctgggtcacaagtcccag-cactgttgaagctcctctccctgca 1386
|||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 640 cctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgca 590
>BF01019A1H08
Length = 504
Score = 77.8 bits (39), Expect = 5e-14
Identities = 55/59 (93%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 1329 cccttaatcctacacctgggtcacaagtcccag-cactgttgaagctcctctccctgca 1386
||||||| |||||||||||||| ||| |||||| |||||||||||||||||||||||||
Sbjct: 480 cccttaaacctacacctgggtcgcaactcccaggcactgttgaagctcctctccctgca 422
>BF14_335_C4
Length = 1491
Score = 75.8 bits (38), Expect = 2e-13
Identities = 51/54 (94%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 1329 cccttaatcctacacctgggtcacaagtccca-gcactgttgaagctcctctcc 1381
||||||| |||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 1249 cccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctctcc 1302
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 224,730
Number of extensions: 5125
Number of successful extensions: 5125
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 5121
Number of HSP's successfully gapped: 4
Length of query: 1519
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1502
Effective length of database: 8,119,229
Effective search space: 12195081958
Effective search space used: 12195081958
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)