BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21299 (UTR included)
(2650 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3436_C1 1443 0.0
>BF14_3436_C1
Length = 1006
Score = 1443 bits (728), Expect = 0.0
Identities = 799/828 (96%), Gaps = 21/828 (2%)
Strand = Plus / Plus
Query: 436 ggattagtaacataagttgacattataacatcttaaaaatggcagaggtcgaagaaaaag 495
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 179 ggattagtaacataacttgacatcataacatcttaaaaatggcagaggtcgaagaaaaag 238
Query: 496 tgataatgactcccaagagcaaaacagctaattctacagtattaatagtagagagaaaaa 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tgataatgactcccaagagcaaaacagctaattctacagtattaatagtagagagaaaaa 298
Query: 556 tagcggaagcagagcctagtgataaaatacatgtggctggcggtgaccatacaggaataa 615
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tagcggaagcagagcctagcgataaaatacatgtggctggcggtgaccatacaggaataa 358
Query: 616 taataaacaaggaaaaagtttacgaaaatggagtaaccgaaccttgtcaggcacagctag 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 taataaacaaggaaaaagtttacgaaaatggagtaaccgaaccttgtcaggcacagctag 418
Query: 676 agttcagtgtgtatttggtatcagcgaacaccggtagtcacacacgtgaagcgagaggtt 735
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 419 agttcagtgtgtatttggtatcagcaaacaccggtagtcacacacgtgaagcgagaggtt 478
Query: 736 taaagttctggttcaagccggaactgtctcttgatgattgcgctcatgaagcacaagcgt 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 taaagttctggttcaagccggaactgtctcttgatgattgcgctcatgaagcacaagcgt 538
Query: 796 tcttccgagaattggtcagtccacaagacttcccaaaagattatgttgggttcatcaaga 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 tcttccgagaattggtcagtccacaagacttcccaaaagattatgttgggttcatcaaga 598
Query: 856 agatcattaaactgatgcaaaataagtatcacaaattgaagcttctggaaatcgaactca 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 agatcattaaactgatgcaaaataagtatcacaaattgaagcttctggaaatcgaactca 658
Query: 916 gacaagaaggtgcatgtgatccgcctccag---------------------ctttcattg 954
|||||||||||||||||||||||||||||| |||||||||
Sbjct: 659 gacaagaaggtgcatgtgatccgcctccagaagcaaacggtgaaataacgactttcattg 718
Query: 955 aagataatctcgcaaatcaaacattaatatctgagcagagagtgctggatatgatagaaa 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 aagataatctcgcaaatcaaacattaatatctgagcagagagtgctggatatgatagaaa 778
Query: 1015 atgcatatccaaatcctttatccgtggatcactttgttgctgccggcaaatggtcgaagg 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 atgcatatccaaatcctttatccgtggatcactttgttgctgccggcaaatggtcgaagg 838
Query: 1075 cggatgtcaaggacgcgctggaatcgttggaggagaagggtctgacgcgtctcatgtccg 1134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839 cggatgtcaaggacgcgctggaatcgttggaggagaagggtctgacgcgtctcatgtccg 898
Query: 1135 acggcgtgtacgttaggcaacacagcatcgatactcaggttgtgaaacaaatgccaaccc 1194
|||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 899 acggcgtgtacgttagacaacatagcatcgacactcaggttgtgaaacaaatgccaaccc 958
Query: 1195 tgagttcagcccggcagccaacaatcgcgatagtcacagccctgtact 1242
|||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 959 tgagctcagcccggcagccaacaatcgcgatagtcacagccctgtact 1006
Score = 222 bits (112), Expect = 2e-57
Identities = 112/112 (100%)
Strand = Plus / Plus
Query: 95 tcacttggatgttgacattataattgtagtctgacgaatataaatattgtttttctttgt 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcacttggatgttgacattataattgtagtctgacgaatataaatattgtttttctttgt 60
Query: 155 tttgggttttgttttaattgaagaagttcagttttttctctggatatataag 206
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttgggttttgttttaattgaagaagttcagttttttctctggatatataag 112
Score = 129 bits (65), Expect = 2e-29
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 298 agctagcaattgatctaacaagtgattcaagtttagaaggttagcaagtgtcaaccttgt 357
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 agctggcaattgatctaacaagtgattcaagtttagaaggttagcaagtgtcaaccttgt 170
Query: 358 gcttcgaag 366
|||||||||
Sbjct: 171 gcttcgaag 179
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 288,466
Number of extensions: 5407
Number of successful extensions: 5407
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5407
Number of HSP's successfully gapped: 4
Length of query: 2650
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2633
Effective length of database: 8,119,229
Effective search space: 21377929957
Effective search space used: 21377929957
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)