BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21303 (UTR included)
(2410 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01043A2C01 1346 0.0
BF14_1072_C1 454 e-127
>BF01043A2C01
Length = 703
Score = 1346 bits (679), Expect = 0.0
Identities = 697/703 (99%)
Strand = Plus / Plus
Query: 481 atacgagttttggtggtacaatggctcagccgagtcaagtaactcttaatatagaggatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atacgagttttggtggtacaatggctcagccgagtcaagtaactcttaatatagaggatg 60
Query: 541 agaaccctgattcagtagaaaatagtaatcttaataatgcactccatagaacggaccctc 600
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaaccctgattcagtggaaaatagtaatcttaataatgcactccatagaacggaccctc 120
Query: 601 catccagaccaatggtcgcaaatagaagtaatttaggcctcggagacagacttaatagtg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 catccagaccaatggtcgcaaatagaagtaatttaggcctcggagacagacttaatagtg 180
Query: 661 ttttcagggaaataagaccgttagtagaacatgcaagaatgggcaacaattcaagacttt 720
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttttcagggaaataagacccctagtagaacatgcaagaatgggcaacaattcaagacttt 240
Query: 721 ctctaccaacgtggttaccgaggaattcactgggcatccaccaatccggggaggtgacgc 780
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 241 ctctaccaacgtggttaccgaggaattcactgggcatccaccaatctggggaggtgacac 300
Query: 781 aaagaccacagagttctatagcccatgtaaatcttggctctacggctcaaacatacattg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaagaccacagagttctatagcccatgtaaatcttggctctacggctcaaacatacattg 360
Query: 841 taacagatagaggacttcccatgtcaccgagacatcagaatcacgggatgagcaacagtg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taacagatagaggacttcccatgtcaccgagacatcagaatcacgggatgagcaacagtg 420
Query: 901 cttcaaatgattcaaatgtatcagaaagagcacaggatcaggtagacataaatgtatcgg 960
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cttccaatgattcaaatgtatcagaaagagcacaggatcaggtagacataaatgtatcgg 480
Query: 961 tgaatccctcaaacaataataatattaatgacaatgcagataacgatagtcagagtgaag 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgaatccctcaaacaataataatattaatgacaatgcagataacgatagtcagagtgaag 540
Query: 1021 acggaacccagcaggtagttgatgttagagccactttgaacctgttgttgcgttatgctc 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acggaacccagcaggtagttgatgttagagccactttgaacctgttgttgcgttatgctc 600
Query: 1081 cgttctatataattctatacattaaatacatgtacgacagtcgtgagggtatattcacat 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cgttctatataattctatacattaaatacatgtacgacagtcgtgagggtatattcacat 660
Query: 1141 ttgtggtattattatgcacattctcacacggaaatggcttggt 1183
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttgtggtattattatgcacattctcacacggaaatggcttggt 703
>BF14_1072_C1
Length = 960
Score = 454 bits (229), Expect = e-127
Identities = 232/233 (99%)
Strand = Plus / Plus
Query: 2178 cagaattaaattgtaaatttttaataataattcggtaaaaagcagagaaatattttttta 2237
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 cagaattaaattgtaaatttttaataataattccgtaaaaagcagagaaatattttttta 60
Query: 2238 aatggtaattatataatttgacacatatgcatttgacatatgtcatcgtcggagacggag 2297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatggtaattatataatttgacacatatgcatttgacatatgtcatcgtcggagacggag 120
Query: 2298 tcatagtttaatgttgtgttaacggattgcgcaatactaactaatagcaatttaatcttt 2357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcatagtttaatgttgtgttaacggattgcgcaatactaactaatagcaatttaatcttt 180
Query: 2358 attaaaattaaattaacatatagcgtattaaacacttacagttacttaaaaaa 2410
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attaaaattaaattaacatatagcgtattaaacacttacagttacttaaaaaa 233
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 303,681
Number of extensions: 6968
Number of successful extensions: 6968
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6968
Number of HSP's successfully gapped: 2
Length of query: 2410
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2393
Effective length of database: 8,119,229
Effective search space: 19429314997
Effective search space used: 19429314997
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)